RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 BCL9O00512 1426 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 NPHP3-ACAD11A0A0J9YXS1 232 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 SMAPO00193 183 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 MAPK13O15264 365 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 WFS1O76024 890 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 PPP1R2P41236 205 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 TECP42680 631 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 OR52E8Q6IFG1 317 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 ASRGL1Q7L266 308 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 CCDC105Q8IYK2 499 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 BLIDQ8IZY5 108 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 KBTBD4Q9NVX7 518 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZNF652Q9Y2D9 606 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 C5P01031 1676 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 GSTTP1A0A1W2PQM5 241 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 ATP5HO75947 161 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 AFPP02771 609 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 SLC5A1P13866 664 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 PTK2Q05397 1052 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 CALCOCO2Q13137 446 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 AUHQ13825 339 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 Q4G0T1 1027 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 ZC2HC1CQ53FD0 456 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 UBAP2Q5T6F2 1119 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 SPTY2D1Q68D10 685 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 GALNT17Q6IS24 598 aa11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 N4BP2Q86UW6 1770 aaPredicted RBP11.15□□□□□ -0.62
TNFAIP3-208ENST00000615468 GSG1L2A8MUP6 293 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 BAG2O95816 211 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 HSPA1LP34931 641 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 TXNRD1Q16881 649 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 JAMLQ86YT9 394 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 LCORLQ8N3X6 602 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 SETDB2Q96T68 719 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 CDCA7Q9BWT1 371 aaPredicted RBP11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 LARSQ9P2J5 1176 aaKnown RBP11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 PDP2Q9P2J9 529 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 PCDHGA4Q9Y5G9 962 aa11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 GOLGB1Q14789 3259 aaKnown RBP11.15□□□□□ -0.63
TNFAIP3-208ENST00000615468 TJP3O95049 919 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 PDE8BO95263 885 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 NUDT17P0C025 328 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 RFC4P35249 363 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 TMEM62Q0P6H9 643 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 SH2D4BQ5SQS7 431 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 SYCE1Q8N0S2 351 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ENAHQ8N8S7 591 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 KIAA0895Q8NCT3 520 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 MRRFQ96E11 262 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 CENPKQ9BS16 269 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 COL18A1P39060 1754 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 CYP2D7A0A087X1C5 515 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 MARCH6O60337 910 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 OATP04181 439 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 CALML3P27482 149 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ATP5DP30049 168 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 CDR2Q01850 454 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 DNAJC3Q13217 504 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 MTA1Q13330 715 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 P3H1Q32P28 736 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 KHDC1Q4VXA5 237 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ARHGAP18Q8N392 663 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 TPCN2Q8NHX9 752 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 CTNNAL1Q9UBT7 734 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 MRC1P22897 1456 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 MYH1P12882 1939 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 SMIM22K7EJ46 135 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ADAMTS3O15072 1205 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 BAG3O95817 575 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 LMNAP02545 664 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 MARK3P27448 753 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 SERPINB3P29508 390 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZBTB16Q05516 673 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 PPP2R5BQ15173 497 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 FOXB2Q5VYV0 432 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 TBC1D9BQ66K14 1250 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ARHGEF18Q6ZSZ5 1173 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 NMD3Q96D46 503 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 RBM17Q96I25 401 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZNF333Q96JL9 665 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 CYTH2Q99418 400 aa11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 BZW2Q9Y6E2 419 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-208ENST00000615468 KRT36O76013 467 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 GJB6O95452 261 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 ACTN1P12814 892 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 CNPY1Q3B7I2 92 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 PDCD7Q8N8D1 485 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 ARL10Q8N8L6 244 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 TMOD4Q9NZQ9 345 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 COL4A3BPQ9Y5P4 624 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 SUPT3HO75486 399 aa11.13□□□□□ -0.63
TNFAIP3-208ENST00000615468 CAMTA2O94983 1202 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms