RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 KSR1Q8IVT5 923 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 ZNF668Q96K58 619 aaPredicted RBP14.69□□□□□ -0.06
MDC1-209ENST00000613547 FDXACB1Q9BRP7 624 aaPredicted RBP14.69□□□□□ -0.06
MDC1-209ENST00000613547 FTHL17Q9BXU8 183 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 C17orf75Q9HAS0 396 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 CDHR5Q9HBB8 845 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 GPRC5CQ9NQ84 441 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 KCNG1Q9UIX4 513 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 ODF2LQ9ULJ1 636 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 TANC1Q9C0D5 1861 aa14.69□□□□□ -0.06
MDC1-209ENST00000613547 LRRIQ4A6NIV6 560 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 HIP1RO75146 1068 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 TBCAO75347 108 aaKnown RBP14.68□□□□□ -0.06
MDC1-209ENST00000613547 GLRA2P23416 452 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 NAMPTP43490 491 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 AMPD3Q01432 767 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 CAPSQ13938 189 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 PCBP1Q15365 356 aaKnown RBP eCLIP14.68□□□□□ -0.06
MDC1-209ENST00000613547 SHHQ15465 462 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 ZBTB8OSQ8IWT0 167 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 DEPTORQ8TB45 409 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 ASAP3Q8TDY4 903 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 TMEM40Q8WWA1 233 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 HERVK_113Q902F9 699 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 DHX58Q96C10 678 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 C2orf40Q9H1Z8 148 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 AGO3Q9H9G7 860 aaKnown RBP14.68□□□□□ -0.06
MDC1-209ENST00000613547 MAGEF1Q9HAY2 307 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 KCNH3Q9ULD8 1083 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 PADI3Q9ULW8 664 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 ST3GAL5Q9UNP4 418 aa14.68□□□□□ -0.06
MDC1-209ENST00000613547 COLQQ9Y215 455 aaPredicted RBP14.68□□□□□ -0.06
MDC1-209ENST00000613547 NOC2LQ9Y3T9 749 aaKnown RBP14.68□□□□□ -0.06
MDC1-209ENST00000613547 A0A087X0B3 334 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 POLR2DO15514 142 aaKnown RBP14.67□□□□□ -0.06
MDC1-209ENST00000613547 PFKFB1P16118 471 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 NCBP1Q09161 790 aaKnown RBP14.67□□□□□ -0.06
MDC1-209ENST00000613547 RAD51AP2Q09MP3 1159 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 DMP1Q13316 513 aaPredicted RBP14.67□□□□□ -0.06
MDC1-209ENST00000613547 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 NAALADL2Q58DX5 795 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 C9orf50Q5SZB4 431 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 CATSPER4Q7RTX7 472 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 FAM228AQ86W67 206 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 CEP57L1Q8IYX8 460 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
MDC1-209ENST00000613547 VWCEQ96DN2 955 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 NFKBIZQ9BYH8 718 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 TNMDQ9H2S6 317 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 IFT122Q9HBG6 1241 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 LARSQ9P2J5 1176 aaKnown RBP14.67□□□□□ -0.06
MDC1-209ENST00000613547 USP25Q9UHP3 1055 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 SLC4A7Q9Y6M7 1214 aa14.67□□□□□ -0.06
MDC1-209ENST00000613547 TRIP12Q14669 1992 aaPredicted RBP14.67□□□□□ -0.06
MDC1-209ENST00000613547 PHLPP2Q6ZVD8 1323 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 A0A1B0GVL5 298 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 INO80B-WBP1J3KQ70 363 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 ERLIN2O94905 339 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 FAM13AO94988 1023 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 AMHP03971 560 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 ZSCAN20P17040 1043 aaPredicted RBP14.66□□□□□ -0.06
MDC1-209ENST00000613547 EFNA5P52803 228 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 SMTNP53814 917 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 PTENP60484 403 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 E2F4Q16254 413 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 FSIP1Q8NA03 581 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 LRRC15Q8TF66 581 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 CCDC34Q96HJ3 373 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 REEP2Q9BRK0 252 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 OSBPL7Q9BZF2 842 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 ERVK-5Q9HDB9 667 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
MDC1-209ENST00000613547 WDR81Q562E7 1941 aa14.66□□□□□ -0.06
MDC1-209ENST00000613547 ARID2Q68CP9 1835 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 DENND3A2RUS2 1198 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 CCDC169A6NNP5 214 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 PLS3P13797 630 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 SYKP43405 635 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 PEX3P56589 373 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 WDR5P61964 334 aaKnown RBP14.65□□□□□ -0.06
MDC1-209ENST00000613547 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
MDC1-209ENST00000613547 MAPK7Q13164 816 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 ARSHQ5FYA8 562 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
MDC1-209ENST00000613547 DAW1Q8N136 415 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 BSNDQ8WZ55 320 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 DDX12PQ92771 950 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 SLC9A7Q96T83 725 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 ZHX3Q9H4I2 956 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 PARVGQ9HBI0 331 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 POLD4Q9HCU8 107 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 KMT5AQ9NQR1 393 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 CHST12Q9NRB3 414 aa14.65□□□□□ -0.06
MDC1-209ENST00000613547 NPHP3-ACAD11A0A0J9YXS1 232 aa14.64□□□□□ -0.07
MDC1-209ENST00000613547 FAM237AA0A1B0GTK4 181 aa14.64□□□□□ -0.07
MDC1-209ENST00000613547 SFI1A8K8P3 1242 aa14.64□□□□□ -0.07
MDC1-209ENST00000613547 H0YCG3 227 aa14.64□□□□□ -0.07
MDC1-209ENST00000613547 CSDE1O75534 798 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms