RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 IQUBQ8NA54 791 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 TMEM40Q8WWA1 233 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 CHAMP1Q96JM3 812 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 ZNF668Q96K58 619 aaPredicted RBP15.8■□□□□ 0.12
CTSA-219ENST00000607841 PANK2Q9BZ23 570 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 OSBPL7Q9BZF2 842 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 CUEDC2Q9H467 287 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 C17orf75Q9HAS0 396 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 ERVK-5Q9HDB9 667 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 GPRC5CQ9NQ84 441 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 ST3GAL5Q9UNP4 418 aa15.8■□□□□ 0.12
CTSA-219ENST00000607841 KRT18P05783 430 aaKnown RBP15.79■□□□□ 0.12
CTSA-219ENST00000607841 CMA1P23946 247 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 DHX8Q14562 1220 aaKnown RBP15.79■□□□□ 0.12
CTSA-219ENST00000607841 MCM6Q14566 821 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 FAM228AQ86W67 206 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 GPBP1Q86WP2 473 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 PDILTQ8N807 584 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 PHOSPHO2Q8TCD6 241 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 SLC9A7Q96T83 725 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 RUSC1Q9BVN2 902 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 NFKBIZQ9BYH8 718 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 LRRC27Q9C0I9 530 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 C2orf40Q9H1Z8 148 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 IFT122Q9HBG6 1241 aa15.79■□□□□ 0.12
CTSA-219ENST00000607841 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 LRRIQ4A6NIV6 560 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 HIP1RO75146 1068 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 AMHP03971 560 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 ZSCAN20P17040 1043 aaPredicted RBP15.78■□□□□ 0.12
CTSA-219ENST00000607841 NAMPTP43490 491 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 PTENP60484 403 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 NCBP1Q09161 790 aaKnown RBP15.78■□□□□ 0.12
CTSA-219ENST00000607841 CAPSQ13938 189 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 LRIT3Q3SXY7 679 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
CTSA-219ENST00000607841 ZBTB8OSQ8IWT0 167 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 DEPTORQ8TB45 409 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 GDPD2Q9HCC8 539 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
CTSA-219ENST00000607841 CXXC1Q9P0U4 656 aaPredicted RBP15.78■□□□□ 0.12
CTSA-219ENST00000607841 KCNH3Q9ULD8 1083 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 ODF2LQ9ULJ1 636 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 WDR81Q562E7 1941 aa15.78■□□□□ 0.12
CTSA-219ENST00000607841 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 A0A1W2PQ27 194 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 A0A1W2PQ64 194 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 A0A1W2PQD8 194 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 DENND3A2RUS2 1198 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 POLR2DO15514 142 aaKnown RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 ATP2A2P16615 1042 aaKnown RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 WDR5P61964 334 aaKnown RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 AMPD3Q01432 767 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 DMP1Q13316 513 aaPredicted RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 NAALADL2Q58DX5 795 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 ARSHQ5FYA8 562 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 HABP4Q5JVS0 413 aaKnown RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 CATSPER4Q7RTX7 472 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 DHX58Q96C10 678 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 MAGEF1Q9HAY2 307 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 CHST12Q9NRB3 414 aa15.77■□□□□ 0.12
CTSA-219ENST00000607841 LARSQ9P2J5 1176 aaKnown RBP15.77■□□□□ 0.12
CTSA-219ENST00000607841 PHLPP2Q6ZVD8 1323 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 A0A087X0B3 334 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 ENPP3O14638 875 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 TBCAO75347 108 aaKnown RBP15.76■□□□□ 0.11
CTSA-219ENST00000607841 ERLIN2O94905 339 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 EFNA5P52803 228 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 SMTNP53814 917 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 RAD51AP2Q09MP3 1159 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 TCTN1Q2MV58 587 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 TSPYL2Q9H2G4 693 aaPredicted RBP15.76■□□□□ 0.11
CTSA-219ENST00000607841 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 TMX1Q9H3N1 280 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 C1orf112Q9NSG2 853 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 DACT1Q9NYF0 836 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
CTSA-219ENST00000607841 A0A1B0GVL5 298 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 CCDC169A6NNP5 214 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
CTSA-219ENST00000607841 FAM13AO94988 1023 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 PLS3P13797 630 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 FGFR4P22455 802 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 AXLP30530 894 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 PEX3P56589 373 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 E2F4Q16254 413 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 CDCA2Q69YH5 1023 aaPredicted RBP15.75■□□□□ 0.11
CTSA-219ENST00000607841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.75■□□□□ 0.11
CTSA-219ENST00000607841 CEP57L1Q8IYX8 460 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 MYOCDQ8IZQ8 938 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 DAW1Q8N136 415 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 BSNDQ8WZ55 320 aa15.75■□□□□ 0.11
CTSA-219ENST00000607841 MRPS27Q92552 414 aaKnown RBP15.75■□□□□ 0.11
CTSA-219ENST00000607841 ADAM2Q99965 735 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms