RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 LRRC55Q6ZSA7 311 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 C4orf19Q8IY42 314 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 EFHBQ8N7U6 833 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 COLGALT1Q8NBJ5 622 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 C8orf76Q96K31 380 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 INO80BQ9C086 356 aaPredicted RBP14.95□□□□□ -0.02
CTSA-213ENST00000606782 DHX33Q9H6R0 707 aaKnown RBP14.95□□□□□ -0.02
CTSA-213ENST00000606782 CYP26B1Q9NR63 512 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 SUCLA2Q9P2R7 463 aaPredicted RBP14.95□□□□□ -0.02
CTSA-213ENST00000606782 KIF3AQ9Y496 699 aa14.95□□□□□ -0.02
CTSA-213ENST00000606782 A0A087WZ62 844 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 FSCN2O14926 492 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 CCNT1O60563 726 aaKnown RBP14.94□□□□□ -0.02
CTSA-213ENST00000606782 TBX10O75333 385 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 FGF18O76093 207 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 EYA4O95677 639 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 LAG3P18627 525 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 COL9A1P20849 921 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 KRT2P35908 639 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 PLCB3Q01970 1234 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 SMAD2Q15796 467 aaKnown RBP14.94□□□□□ -0.02
CTSA-213ENST00000606782 LARP1BQ659C4 914 aaKnown RBP14.94□□□□□ -0.02
CTSA-213ENST00000606782 PDE12Q6L8Q7 609 aaKnown RBP14.94□□□□□ -0.02
CTSA-213ENST00000606782 EXOC8Q8IYI6 725 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 SLFN12Q8IYM2 578 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 NLRP7Q8WX94 980 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 RSPH1Q8WYR4 309 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 ZNF668Q96K58 619 aaPredicted RBP14.94□□□□□ -0.02
CTSA-213ENST00000606782 MSLNLQ96KJ4 702 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 FDXACB1Q9BRP7 624 aaPredicted RBP14.94□□□□□ -0.02
CTSA-213ENST00000606782 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
CTSA-213ENST00000606782 WRAP73Q9P2S5 460 aaPredicted RBP14.94□□□□□ -0.02
CTSA-213ENST00000606782 PLXNA4Q9HCM2 1894 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 FAM205CA6NFA0 338 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 LINC01565O15544 149 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 MBTPS2O43462 519 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 GPR37L1O60883 481 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 ATF7P17544 494 aaPredicted RBP14.93□□□□□ -0.02
CTSA-213ENST00000606782 ANP32AP39687 249 aaKnown RBP14.93□□□□□ -0.02
CTSA-213ENST00000606782 ZP2Q05996 745 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 NR5A1Q13285 461 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 CLLU1OSQ5K130 101 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 ADGRD2Q7Z7M1 963 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 POTEDQ86YR6 584 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 SH2D3AQ9BRG2 576 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 IFT122Q9HBG6 1241 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 BRMS1Q9HCU9 246 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 TLR9Q9NR96 1032 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 CLEC1BQ9P126 229 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 HCSTQ9UBK5 93 aa14.93□□□□□ -0.02
CTSA-213ENST00000606782 FSD2A1L4K1 749 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 GAS2O43903 313 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 ZNF623O75123 536 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 CSDE1O75534 798 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 LYPLA2O95372 231 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 BAG4O95429 457 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 HSP90AA1P07900 732 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 PDCP20941 246 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 IBSPP21815 317 aaPredicted RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 FGFR4P22455 802 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 SFPQP23246 707 aaKnown RBP eCLIP14.92□□□□□ -0.02
CTSA-213ENST00000606782 PPM1AP35813 382 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 RFC5P40937 340 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 NPEPPSP55786 919 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 ERVFC1P60507 584 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 COASYQ13057 564 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 SMAD4Q13485 552 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 TRIM29Q14134 588 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 SPOUT1Q5T280 376 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 PLA2G4FQ68DD2 849 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 KCNT2Q6UVM3 1135 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 EP400NLQ6ZTU2 488 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 RHPN2Q8IUC4 686 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 ADHFE1Q8IWW8 467 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 THNSL1Q8IYQ7 743 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 LRRC43Q8N309 656 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 ZNF579Q8NAF0 562 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 SPRYD3Q8NCJ5 442 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 MRPS27Q92552 414 aaKnown RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 SCLT1Q96NL6 688 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 CDCA3Q99618 268 aaPredicted RBP14.92□□□□□ -0.02
CTSA-213ENST00000606782 HSD17B14Q9BPX1 270 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 LXNQ9BS40 222 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 IGFLR1Q9H665 355 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 ZSWIM4Q9H7M6 989 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 C11orf16Q9NQ32 467 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 CD207Q9UJ71 328 aa14.92□□□□□ -0.02
CTSA-213ENST00000606782 BTBD18B2RXH4 712 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 SLITRK3O94933 977 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 GLP2RO95838 553 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 SKIP12755 728 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 PDIA4P13667 645 aaKnown RBP14.91□□□□□ -0.02
CTSA-213ENST00000606782 SYT1P21579 422 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 YWHABP31946 246 aaKnown RBP14.91□□□□□ -0.02
CTSA-213ENST00000606782 PHKA2P46019 1235 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 NRIP1P48552 1158 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 GUCY1B3Q02153 619 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 KCNC3Q14003 757 aa14.91□□□□□ -0.02
CTSA-213ENST00000606782 TMEM184AQ6ZMB5 413 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms