RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 LNX1Q8TBB1 728 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-212ENST00000604599 NAP1L3Q99457 506 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-212ENST00000604599 RAB34Q9BZG1 259 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 CARD9Q9H257 536 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 KCTD10Q9H3F6 313 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 MKNK2Q9HBH9 465 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 NENFQ9UMX5 172 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 LRRC42Q9Y546 428 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 LAMB1P07942 1786 aa13.42□□□□□ -0.26
CDCA3-212ENST00000604599 ZNF142P52746 1687 aaPredicted RBP13.41□□□□□ -0.26
CDCA3-212ENST00000604599 E9PMD0 336 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 TSPY3P0CV98 308 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 TSPY8P0CW00 308 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
CDCA3-212ENST00000604599 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 FOXR2Q6PJQ5 311 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 FAM47EQ6ZV65 393 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 CROCCP2Q86T23 111 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 NUDCD1Q96RS6 583 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 PRKAG3Q9UGI9 489 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 PALM3A6NDB9 673 aaPredicted RBP13.41□□□□□ -0.26
CDCA3-212ENST00000604599 WFS1O76024 890 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 AFPP02771 609 aaKnown RBP13.41□□□□□ -0.26
CDCA3-212ENST00000604599 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 ATP6V1C1P21283 382 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 PRDX5P30044 214 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 MPP2Q14168 576 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 RNF220Q5VTB9 566 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 TTC27Q6P3X3 843 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 LONP2Q86WA8 852 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 ZNF34Q8IZ26 560 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 PIGOQ8TEQ8 1089 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 STK32AQ8WU08 396 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 RFFLQ8WZ73 363 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 LRRC27Q9C0I9 530 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 DLGAP2Q9P1A6 1054 aa13.41□□□□□ -0.26
CDCA3-212ENST00000604599 IL2RBP14784 551 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 STX2P32856 288 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 RFC5P40937 340 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 PTGIRP43119 386 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 CASP5P51878 434 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 NPEPPSP55786 919 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 TNIP1Q15025 636 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 VSIG1Q86XK7 387 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 CKAP2Q8WWK9 683 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 ERP27Q96DN0 273 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 ARHGEF26Q96DR7 871 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 TMEM109Q9BVC6 243 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 MYLK2Q9H1R3 596 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 SEPT11Q9NVA2 429 aaKnown RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 CYP39A1Q9NYL5 469 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 ANKIB1Q9P2G1 1089 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 HAO1Q9UJM8 370 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 A0A1B0GVG6 124 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 PHF2O75151 1096 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 MARCKSL1P49006 195 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 DRG2P55039 364 aaKnown RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 PPP2R5EQ16537 467 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 GALNT15Q8N3T1 639 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 PRELID2Q8N945 189 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 FAM13CQ8NE31 585 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 SLC4A9Q96Q91 983 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 PIGSQ96S52 555 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 DNAJC17Q9NVM6 304 aaKnown RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 SEC63Q9UGP8 760 aaKnown RBP13.4□□□□□ -0.26
CDCA3-212ENST00000604599 COL4A1P02462 1669 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 KIF13BQ9NQT8 1826 aa13.4□□□□□ -0.26
CDCA3-212ENST00000604599 CYP19A1P11511 503 aaPredicted RBP13.4□□□□□ -0.27
CDCA3-212ENST00000604599 RARGP13631 454 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 BRAFP15056 766 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 VCAM1P19320 739 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 SSR1P43307 286 aaKnown RBP13.4□□□□□ -0.27
CDCA3-212ENST00000604599 PTDSS1P48651 473 aaKnown RBP13.4□□□□□ -0.27
CDCA3-212ENST00000604599 PEX5P50542 639 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 SESN3P58005 492 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 KLC1Q07866 573 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 SLC5A9Q2M3M2 681 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 GRIPAP1Q4V328 841 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 SPTY2D1Q68D10 685 aaPredicted RBP13.4□□□□□ -0.27
CDCA3-212ENST00000604599 CCDC137Q6PK04 289 aaKnown RBP13.4□□□□□ -0.27
CDCA3-212ENST00000604599 CCDC65Q8IXS2 484 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 TTC8Q8TAM2 541 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 CDC42EP4Q9H3Q1 356 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms