RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 LRWD1Q9UFC0 647 aa9.8□□□□□ -0.84
SSBP4-208ENST00000600628 ADGRA3Q8IWK6 1321 aa9.8□□□□□ -0.84
SSBP4-208ENST00000600628 TRIOO75962 3097 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 PLXNA4Q9HCM2 1894 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 A0A087WZ62 844 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 PP2D1A8MPX8 630 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 H3BQV1 296 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 SLC26A4O43511 780 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 MARCH6O60337 910 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 CSDE1O75534 798 aaKnown RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 UPP2O95045 317 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 GLRA2P23416 452 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 POLGP54098 1239 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 GNL2Q13823 731 aaKnown RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 MXD4Q14582 209 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 COL19A1Q14993 1142 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 CDCA2Q69YH5 1023 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 MCTP1Q6DN14 999 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 SRGAP1Q7Z6B7 1085 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 RHPN2Q8IUC4 686 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 CMTR2Q8IYT2 770 aaKnown RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 ERMNQ8TAM6 284 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 LRRC15Q8TF66 581 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 TCP11Q8WWU5 503 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 PSPC1Q8WXF1 523 aaKnown RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 KCNN1Q92952 543 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 TMEM143Q96AN5 459 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 AK8Q96MA6 479 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 SAMD11Q96NU1 681 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 TGS1Q96RS0 853 aaKnown RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 FDXACB1Q9BRP7 624 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 GCOM2Q9BZD3 368 aaPredicted RBP9.79□□□□□ -0.84
SSBP4-208ENST00000600628 TMEM161AQ9NX61 479 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 MTCH2Q9Y6C9 303 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 MYH11P35749 1972 aa9.79□□□□□ -0.84
SSBP4-208ENST00000600628 A0A087WWV3 80 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 H3BNC9 293 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 BMP15O95972 392 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 CYP11B2P19099 503 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 NFX1Q12986 1120 aaKnown RBP9.78□□□□□ -0.84
SSBP4-208ENST00000600628 GRB10Q13322 594 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 CAPSQ13938 189 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 TMEM119Q4V9L6 283 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 EPC2Q52LR7 807 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 HAUS3Q68CZ6 603 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 DTHD1Q6ZMT9 781 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 KCNK18Q7Z418 384 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 MRPL10Q7Z7H8 261 aaKnown RBP9.78□□□□□ -0.84
SSBP4-208ENST00000600628 ECHDC2Q86YB7 292 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 DAW1Q8N136 415 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 MCPH1Q8NEM0 835 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 ASAP3Q8TDY4 903 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 PPM1EQ8WY54 764 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 ZNF668Q96K58 619 aaPredicted RBP9.78□□□□□ -0.84
SSBP4-208ENST00000600628 CASD1Q96PB1 797 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 PNMA5Q96PV4 448 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 PPP1R16BQ96T49 567 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 YME1L1Q96TA2 773 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 MTRQ99707 1265 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 INO80BQ9C086 356 aaPredicted RBP9.78□□□□□ -0.84
SSBP4-208ENST00000600628 ATP6V0A4Q9HBG4 840 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 AGPAT5Q9NUQ2 364 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 GINS2Q9Y248 185 aa9.78□□□□□ -0.84
SSBP4-208ENST00000600628 INPPL1O15357 1258 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 STX6O43752 255 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 GTPBP6O43824 516 aaPredicted RBP9.77□□□□□ -0.85
SSBP4-208ENST00000600628 EYA4O95677 639 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 EOMESO95936 686 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 RB1P06400 928 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 PDIA4P13667 645 aaKnown RBP9.77□□□□□ -0.85
SSBP4-208ENST00000600628 FGFR4P22455 802 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 SFPQP23246 707 aaKnown RBP eCLIP9.77□□□□□ -0.85
SSBP4-208ENST00000600628 CDC25AP30304 524 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 BMPR1AP36894 532 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 CCT6AP40227 531 aaKnown RBP9.77□□□□□ -0.85
SSBP4-208ENST00000600628 PHKA2P46019 1235 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 NASPP49321 788 aaPredicted RBP9.77□□□□□ -0.85
SSBP4-208ENST00000600628 GRIN1Q05586 938 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 MBTD1Q05BQ5 628 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 MAPK7Q13164 816 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 CAMK1Q14012 370 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 CCDC85BQ15834 202 aaPredicted RBP9.77□□□□□ -0.85
SSBP4-208ENST00000600628 FAM187BQ17R55 369 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 CLLU1OSQ5K130 101 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 FAM102BQ5T8I3 360 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 PADI6Q6TGC4 694 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 C1orf186Q6ZWK4 172 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 TMEM192Q8IY95 271 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 RNF149Q8NC42 400 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 NLRP7Q8WX94 980 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 RSPH1Q8WYR4 309 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 BSNDQ8WZ55 320 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 P2RX5Q93086 422 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 PLVAPQ9BX97 442 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 RAB34Q9BZG1 259 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 CCDC113Q9H0I3 377 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms