RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 PLA2G4FQ68DD2 849 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 PHLDB3Q6NSJ2 640 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 GOLGA5Q8TBA6 731 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 TRERF1Q96PN7 1200 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 APEX2Q9UBZ4 518 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 RIPK3Q9Y572 518 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 TESPA1A2RU30 521 aaPredicted RBP24.69■■□□□ 1.54
SRRM1-222ENST00000596378 NFKBIEO00221 500 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 TULP1O00294 542 aaPredicted RBP24.69■■□□□ 1.54
SRRM1-222ENST00000596378 CCNE2O96020 404 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 TNFAIP1Q13829 316 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 SLC9A9Q8IVB4 645 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 TAF4BQ92750 862 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 FAM204AQ9H8W3 233 aa24.69■■□□□ 1.54
SRRM1-222ENST00000596378 DBR1Q9UK59 544 aaKnown RBP24.69■■□□□ 1.54
SRRM1-222ENST00000596378 CTDP1Q9Y5B0 961 aaPredicted RBP24.69■■□□□ 1.54
SRRM1-222ENST00000596378 CTNND1O60716 968 aaKnown RBP24.68■■□□□ 1.54
SRRM1-222ENST00000596378 PLS3P13797 630 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 GALCP54803 685 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 NPEPPSP55786 919 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 ZNF280AP59817 542 aaPredicted RBP24.68■■□□□ 1.54
SRRM1-222ENST00000596378 DALRD3Q5D0E6 543 aaKnown RBP24.68■■□□□ 1.54
SRRM1-222ENST00000596378 MICALL2Q8IY33 904 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 SLC30A5Q8TAD4 765 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 ATG4CQ96DT6 458 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 CCDC43Q96MW1 224 aaKnown RBP24.68■■□□□ 1.54
SRRM1-222ENST00000596378 PPP1R1BQ9UD71 204 aaPredicted RBP24.68■■□□□ 1.54
SRRM1-222ENST00000596378 HACL1Q9UJ83 578 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 EMSYQ7Z589 1322 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 PRAMEF18Q5VWM3 479 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 RNF207Q6ZRF8 634 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 PDCD2LQ9BRP1 358 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 PXMP2Q9NR77 195 aa24.68■■□□□ 1.54
SRRM1-222ENST00000596378 SLC16A4O15374 487 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 HEXIM1O94992 359 aaKnown RBP24.67■■□□□ 1.54
SRRM1-222ENST00000596378 PPP3CAQ08209 521 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 KCTD19Q17RG1 926 aaPredicted RBP24.67■■□□□ 1.54
SRRM1-222ENST00000596378 PALB2Q86YC2 1186 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 USP38Q8NB14 1042 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 LMO3Q8TAP4 145 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 PKNOX2Q96KN3 472 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 OSGEPQ9NPF4 335 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.67■■□□□ 1.548e-7■■■■■ 81.8
SRRM1-222ENST00000596378 ANXA13P27216 316 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 BAG6P46379 1132 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 CARSP49589 748 aaKnown RBP24.67■■□□□ 1.54
SRRM1-222ENST00000596378 PEX3P56589 373 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 GUCY2DQ02846 1103 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 HAUS6Q7Z4H7 955 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 KLHL7Q8IXQ5 586 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 TSEN2Q8NCE0 465 aaKnown RBP24.67■■□□□ 1.54
SRRM1-222ENST00000596378 RUBCNQ92622 972 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 TBC1D22BQ9NU19 505 aa24.67■■□□□ 1.54
SRRM1-222ENST00000596378 IGSF9BQ9UPX0 1349 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 KRT13P13646 458 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 ABCB4P21439 1286 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 GCLMP48507 274 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 GMPSP49915 693 aaPredicted RBP24.66■■□□□ 1.54
SRRM1-222ENST00000596378 ARHGEF16Q5VV41 709 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 ZKSCAN4Q969J2 545 aaPredicted RBP24.66■■□□□ 1.54
SRRM1-222ENST00000596378 ACCSQ96QU6 501 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 EPB41L5Q9HCM4 733 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 SEPT11Q9NVA2 429 aaKnown RBP24.66■■□□□ 1.54
SRRM1-222ENST00000596378 PSD3Q9NYI0 1048 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 TAS2R14Q9NYV8 317 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 GJA3Q9Y6H8 435 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 GOLGA6BA6NDN3 693 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 VWA5AO00534 786 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 CEP104O60308 925 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 EPHB4P54760 987 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 TRADDQ15628 312 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 IFI16Q16666 785 aaKnown RBP24.66■■□□□ 1.54
SRRM1-222ENST00000596378 GLE1Q53GS7 698 aaKnown RBP24.66■■□□□ 1.54
SRRM1-222ENST00000596378 PLEKHO2Q8TD55 490 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 IFT81Q8WYA0 676 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 SYT11Q9BT88 431 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 KIFC3Q9BVG8 833 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 TMEM206Q9H813 350 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 HSPBP1Q9NZL4 362 aa24.66■■□□□ 1.54
SRRM1-222ENST00000596378 FOXN3O00409 490 aaPredicted RBP24.65■■□□□ 1.54
SRRM1-222ENST00000596378 ZBED4O75132 1171 aa24.65■■□□□ 1.54
SRRM1-222ENST00000596378 SF3B2Q13435 895 aaKnown RBP24.65■■□□□ 1.54
SRRM1-222ENST00000596378 BAATQ14032 418 aaPredicted RBP24.65■■□□□ 1.54
SRRM1-222ENST00000596378 FAM102BQ5T8I3 360 aa24.65■■□□□ 1.54
SRRM1-222ENST00000596378 DAAM2Q86T65 1068 aa24.65■■□□□ 1.54
SRRM1-222ENST00000596378 ARHGEF19Q8IW93 802 aa24.65■■□□□ 1.54
SRRM1-222ENST00000596378 NFU1Q9UMS0 254 aa24.65■■□□□ 1.54
SRRM1-222ENST00000596378 SRCAPQ6ZRS2 3230 aa24.65■■□□□ 1.54
SRRM1-222ENST00000596378 GOLGA8IPA6NC78 632 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 GOLGA8JA6NMD2 632 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 ZBTB48P10074 688 aaPredicted RBP24.64■■□□□ 1.54
SRRM1-222ENST00000596378 VAMP7P51809 220 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 HNRNPH2P55795 449 aaKnown RBP24.64■■□□□ 1.54
SRRM1-222ENST00000596378 XKR9Q5GH70 373 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 C1orf220Q5T0J3 134 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 PEX26Q7Z412 305 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 METTL13Q8N6R0 699 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 TCEAL9Q9UHQ7 104 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 PARP14Q460N5 1801 aa24.64■■□□□ 1.54
SRRM1-222ENST00000596378 LYPLA2O95372 231 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms