RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 DDX4Q9NQI0 724 aaKnown RBP18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 TAS2R14Q9NYV8 317 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 TMEM110-MUSTN1A8MSY1 372 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 FMO5P49326 533 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 BMT2Q1RMZ1 405 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 FAM133BQ5BKY9 247 aaKnown RBP18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 PTF1AQ7RTS3 328 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 CCDC63Q8NA47 563 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 CTTNBP2NLQ9P2B4 639 aa18.8■□□□□ 0.6
ARHGEF1-213ENST00000595897 MYO3BQ8WXR4 1341 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 KIAA0391O15091 583 aaKnown RBP18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 TGFB1I1O43294 461 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 PPIP5K2O43314 1243 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 C21orf2O43822 256 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 LRRN2O75325 713 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 CLTAP09496 248 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 NMT1P30419 496 aaKnown RBP18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 ELF3P78545 371 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 C6orf118Q5T5N4 469 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 SUFUQ9UMX1 484 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 ASAP2O43150 1006 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 MGRN1O60291 552 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 CYP2J2P51589 502 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 CLUL1Q15846 466 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 ZC2HC1CQ53FD0 456 aaPredicted RBP18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 MAGEC3Q8TD91 643 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 PIGOQ8TEQ8 1089 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 ATXN2LQ8WWM7 1075 aaKnown RBP18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 RGL1Q9NZL6 768 aa18.79■□□□□ 0.6
ARHGEF1-213ENST00000595897 MEIS2O14770 477 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 TRIM49P0CI25 452 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 TRIM49CP0CI26 452 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 FGFR4P22455 802 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ADCY2Q08462 1091 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 AP3B2Q13367 1082 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 USH1GQ495M9 461 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 RC3H1Q5TC82 1133 aaKnown RBP18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 PALB2Q86YC2 1186 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 UBL4BQ8N7F7 174 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 TRPC6Q9Y210 931 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ALG6Q9Y672 507 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ANKRD62A6NC57 917 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 SLURP2P0DP57 97 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 SHMT1P34896 483 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ZNF76P36508 570 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 SNAP25P60880 206 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 IKQ13123 557 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ZDHHC24Q6UX98 284 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 HS2ST1Q7LGA3 356 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 TBC1D1Q86TI0 1168 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 KSR1Q8IVT5 923 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 EPS8L3Q8TE67 593 aaKnown RBP18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 DYDC1Q8WWB3 177 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 NSRP1Q9H0G5 558 aaKnown RBP18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 COG5Q9UP83 839 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 FRMD4BQ9Y2L6 1034 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 SYNGAP1Q96PV0 1343 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 FAM86B1E9PN63 330 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ATP6V1G2O95670 118 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 AGTP01019 485 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 FAM86B2P0C5J1 330 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ITIH4Q14624 930 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 MOXD1Q6UVY6 613 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 CCDC25Q86WR0 208 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 MBOAT7Q96N66 472 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 ADAM7Q9H2U9 754 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 NOD2Q9HC29 1040 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 DONSONQ9NYP3 566 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 CD2APQ9Y5K6 639 aa18.78■□□□□ 0.6
ARHGEF1-213ENST00000595897 TULP1O00294 542 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 TBX3O15119 743 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 PHF2O75151 1096 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 RPSAP08865 295 aaKnown RBP18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 GBP2P32456 591 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 COG2Q14746 738 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 CBWD6Q4V339 395 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 CBWD3Q5JTY5 395 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 CBWD5Q5RIA9 395 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 INTS2Q9H0H0 1204 aaKnown RBP18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 STMN4Q9H169 189 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 USP40Q9NVE5 1235 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 APEX2Q9UBZ4 518 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 RPTORQ8N122 1335 aa18.77■□□□□ 0.6
ARHGEF1-213ENST00000595897 HLA-DOAP06340 250 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 GAP43P17677 238 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 VCAM1P19320 739 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 CHRNA3P32297 505 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 RPL21P46778 160 aaKnown RBP18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 DRG2P55039 364 aaKnown RBP18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 CCDC38Q502W7 563 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 TRPM8Q7Z2W7 1104 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 CROCCP2Q86T23 111 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 RDH13Q8NBN7 331 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 BORCS6Q96GS4 357 aa18.77■□□□□ 0.59
ARHGEF1-213ENST00000595897 FAM20AQ96MK3 541 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms