RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 HES6Q96HZ4 224 aa16.64■□□□□ 0.25
ZNF541-205ENST00000595558 CALR3Q96L12 384 aaKnown RBP16.64■□□□□ 0.25
ZNF541-205ENST00000595558 EIF2AK1Q9BQI3 630 aaKnown RBP16.64■□□□□ 0.25
ZNF541-205ENST00000595558 PAGR1Q9BTK6 254 aa16.64■□□□□ 0.25
ZNF541-205ENST00000595558 SUCLA2Q9P2R7 463 aaPredicted RBP16.64■□□□□ 0.25
ZNF541-205ENST00000595558 ATP8A1Q9Y2Q0 1164 aa16.64■□□□□ 0.25
ZNF541-205ENST00000595558 TMEM150BA6NC51 233 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 CALUO43852 315 aaPredicted RBP16.63■□□□□ 0.25
ZNF541-205ENST00000595558 CLSTN1O94985 981 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 ARP10275 920 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 STAT2P52630 851 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 POU5F1Q01860 360 aaKnown RBP16.63■□□□□ 0.25
ZNF541-205ENST00000595558 SLFN12Q8IYM2 578 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 ATP8B4Q8TF62 1192 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 RAPGEF5Q92565 580 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 DYDC2Q96IM9 177 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 TYW1Q9NV66 732 aaKnown RBP16.63■□□□□ 0.25
ZNF541-205ENST00000595558 VAV3Q9UKW4 847 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 ASTN2O75129 1339 aaPredicted RBP16.63■□□□□ 0.25
ZNF541-205ENST00000595558 GMNCA6NCL1 334 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 PHF20L1A8MW92 1017 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 DLGAP5Q15398 846 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 IFI16Q16666 785 aaKnown RBP16.63■□□□□ 0.25
ZNF541-205ENST00000595558 CCDC13Q8IYE1 715 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 CPXCR1Q8N123 301 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 CNKSR1Q969H4 720 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 BORCS6Q96GS4 357 aa16.63■□□□□ 0.25
ZNF541-205ENST00000595558 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
ZNF541-205ENST00000595558 CHORDC1Q9UHD1 332 aaPredicted RBP16.63■□□□□ 0.25
ZNF541-205ENST00000595558 ATXN2Q99700 1313 aaKnown RBP16.62■□□□□ 0.25
ZNF541-205ENST00000595558 ZMYM2Q9UBW7 1377 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
ZNF541-205ENST00000595558 F8VZ95 297 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 SHBGP04278 402 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 DPEP1P16444 411 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 BYSLQ13895 437 aaKnown RBP16.62■□□□□ 0.25
ZNF541-205ENST00000595558 KRT71Q3SY84 523 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 CBWD6Q4V339 395 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 CBWD3Q5JTY5 395 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 CBWD5Q5RIA9 395 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 SLC30A5Q8TAD4 765 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 GMCL1Q96IK5 515 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 OSBPL7Q9BZF2 842 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 CD248Q9HCU0 757 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 ZBTB21Q9ULJ3 1066 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 IGLV3-22A0A075B6J6 115 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 DNM1LO00429 736 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 LRRN2O75325 713 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 TRIM49P0CI25 452 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 TRIM49CP0CI26 452 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 SREBF1P36956 1147 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 PPP2R2AP63151 447 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 RDH13Q8NBN7 331 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 GPR88Q9GZN0 384 aa16.62■□□□□ 0.25
ZNF541-205ENST00000595558 TISP43B9A030 160 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 CCDC188H7C350 402 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 DDX3YO15523 660 aaKnown RBP16.61■□□□□ 0.25
ZNF541-205ENST00000595558 ATP2C2O75185 946 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 RXRBP28702 533 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 ACTN3Q08043 901 aaPredicted RBP16.61■□□□□ 0.25
ZNF541-205ENST00000595558 DRAP1Q14919 205 aaPredicted RBP16.61■□□□□ 0.25
ZNF541-205ENST00000595558 YTHDF3Q7Z739 585 aaKnown RBP16.61■□□□□ 0.25
ZNF541-205ENST00000595558 EIF1ADQ8N9N8 165 aaKnown RBP16.61■□□□□ 0.25
ZNF541-205ENST00000595558 BANK1Q8NDB2 785 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
ZNF541-205ENST00000595558 TMOD4Q9NZQ9 345 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 AMFRQ9UKV5 643 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 COG5Q9UP83 839 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 CNTNAP1P78357 1384 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 SLITRK3O94933 977 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 RINT1Q6NUQ1 792 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 MICALCLQ6ZW33 695 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 IL31RAQ8NI17 732 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.61■□□□□ 0.25
ZNF541-205ENST00000595558 ALG3Q92685 438 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 CABS1Q96KC9 395 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 VCPKMTQ9H867 229 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 DNAJC12Q9UKB3 198 aa16.61■□□□□ 0.25
ZNF541-205ENST00000595558 CAND2O75155 1236 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 TBCAO75347 108 aaKnown RBP16.6■□□□□ 0.25
ZNF541-205ENST00000595558 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
ZNF541-205ENST00000595558 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
ZNF541-205ENST00000595558 FAM186BQ8IYM0 893 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 ARFGAP2Q8N6H7 521 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 SEC14L1Q92503 715 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 CEP89Q96ST8 783 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 THAP2Q9H0W7 228 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 EPB41L4BQ9H329 900 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
ZNF541-205ENST00000595558 SOX5P35711 763 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 STAT1P42224 750 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 ARHGAP44Q17R89 818 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 BMT2Q1RMZ1 405 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 QSER1Q2KHR3 1735 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 Q4G0T1 1027 aa16.6■□□□□ 0.25
ZNF541-205ENST00000595558 SWT1Q5T5J6 900 aaKnown RBP16.6■□□□□ 0.25
ZNF541-205ENST00000595558 VPS36Q86VN1 386 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms