RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SH3GLB2Q9NR46 395 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 PCDHA4Q9UN74 947 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 HCFC2Q9Y5Z7 792 aa18.42■□□□□ 0.54
LIG1-205ENST00000593425 C2orf71A6NGG8 1288 aa18.41■□□□□ 0.54
LIG1-205ENST00000593425 EOMESO95936 686 aa18.41■□□□□ 0.54
LIG1-205ENST00000593425 TOB2Q14106 344 aaPredicted RBP18.41■□□□□ 0.54
LIG1-205ENST00000593425 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
LIG1-205ENST00000593425 PTPN21Q16825 1174 aa18.41■□□□□ 0.54
LIG1-205ENST00000593425 SUGP1Q8IWZ8 645 aaKnown RBP18.41■□□□□ 0.54
LIG1-205ENST00000593425 FBXL6Q8N531 539 aa18.41■□□□□ 0.54
LIG1-205ENST00000593425 RDM1Q8NG50 284 aa18.41■□□□□ 0.54
LIG1-205ENST00000593425 CASP10Q92851 521 aa18.41■□□□□ 0.54
LIG1-205ENST00000593425 DACT1Q9NYF0 836 aa18.41■□□□□ 0.54
LIG1-205ENST00000593425 CYP3A7-CYP3A51PA0A087WV96 503 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 A0A087WZ62 844 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 IGKV6-21A0A0C4DH24 114 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 M0R2N6 131 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 HOXB8P17481 243 aaPredicted RBP18.4■□□□□ 0.54
LIG1-205ENST00000593425 CYP3A7P24462 503 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 PSMA5P28066 241 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 VCPP55072 806 aaKnown RBP18.4■□□□□ 0.54
LIG1-205ENST00000593425 BCAR1P56945 870 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 NPY5RQ15761 445 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 XKR3Q5GH77 459 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 TMEM173Q86WV6 379 aaPredicted RBP18.4■□□□□ 0.54
LIG1-205ENST00000593425 MRPL43Q8N983 215 aaKnown RBP18.4■□□□□ 0.54
LIG1-205ENST00000593425 ETNPPLQ8TBG4 499 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 LPPQ93052 612 aa18.4■□□□□ 0.54
LIG1-205ENST00000593425 FDXACB1Q9BRP7 624 aaPredicted RBP18.4■□□□□ 0.54
LIG1-205ENST00000593425 MRPL9Q9BYD2 267 aaKnown RBP18.4■□□□□ 0.54
LIG1-205ENST00000593425 GCOM2Q9BZD3 368 aaPredicted RBP18.4■□□□□ 0.54
LIG1-205ENST00000593425 MEIS3P2A8K0S8 358 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 CLASP2O75122 1294 aaKnown RBP18.39■□□□□ 0.53
LIG1-205ENST00000593425 CA8P35219 290 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 PHKA2P46019 1235 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 TCF15Q12870 199 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 LONRF3Q496Y0 759 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 TRIM22Q8IYM9 498 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 BLIDQ8IZY5 108 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 MBOAT7Q96N66 472 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 AIFM3Q96NN9 605 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 LARP6Q9BRS8 491 aaKnown RBP18.39■□□□□ 0.53
LIG1-205ENST00000593425 C22orf23Q9BZE7 217 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 POMKQ9H5K3 350 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 CHST12Q9NRB3 414 aa18.39■□□□□ 0.53
LIG1-205ENST00000593425 ZC3H11AO75152 810 aaKnown RBP eCLIP18.38■□□□□ 0.53
LIG1-205ENST00000593425 DEXIO95424 95 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 SFPQP23246 707 aaKnown RBP eCLIP18.38■□□□□ 0.53
LIG1-205ENST00000593425 PTPN5P54829 565 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 SSRP1Q08945 709 aaKnown RBP18.38■□□□□ 0.53
LIG1-205ENST00000593425 PLA2G4FQ68DD2 849 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 TWF2Q6IBS0 349 aaKnown RBP18.38■□□□□ 0.53
LIG1-205ENST00000593425 ANO5Q75V66 913 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 RHPN2Q8IUC4 686 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 DAGLBQ8NCG7 672 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 AUTS2Q8WXX7 1259 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 ZBP1Q9H171 429 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
LIG1-205ENST00000593425 SUCLA2Q9P2R7 463 aaPredicted RBP18.38■□□□□ 0.53
LIG1-205ENST00000593425 PIN4Q9Y237 131 aaKnown RBP18.38■□□□□ 0.53
LIG1-205ENST00000593425 DENND4AQ7Z401 1863 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 C2CD4DB7Z1M9 353 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 SLC37A4O43826 429 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 MAFO75444 373 aaPredicted RBP18.37■□□□□ 0.53
LIG1-205ENST00000593425 REC8O95072 547 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 PDGFBP01127 241 aaPredicted RBP18.37■□□□□ 0.53
LIG1-205ENST00000593425 WEE2P0C1S8 567 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 ALDH7A1P49419 539 aaKnown RBP18.37■□□□□ 0.53
LIG1-205ENST00000593425 TPRNQ4KMQ1 711 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 ZBTB33Q86T24 672 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 ZNF410Q86VK4 478 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 VPS52Q8N1B4 723 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 BCL7CQ8WUZ0 217 aaPredicted RBP18.37■□□□□ 0.53
LIG1-205ENST00000593425 TRAIPQ9BWF2 469 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 ADAM7Q9H2U9 754 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 NRDE2Q9H7Z3 1164 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 ZSWIM6Q9HCJ5 1215 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 FAM105AQ9NUU6 356 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 TBC1D13Q9NVG8 400 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 ARID2Q68CP9 1835 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 PIEZO1Q92508 2521 aa18.37■□□□□ 0.53
LIG1-205ENST00000593425 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.36■□□□□ 0.53
LIG1-205ENST00000593425 DDX11L8A8MPP1 907 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 EML1O00423 815 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 CXCL14O95715 111 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 DNM2P50570 870 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 CDC42EP1Q00587 391 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 INF2Q27J81 1249 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 CES5AQ6NT32 575 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 MOXD1Q6UVY6 613 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 C12orf76Q8N812 135 aaPredicted RBP18.36■□□□□ 0.53
LIG1-205ENST00000593425 FEZF2Q8TBJ5 459 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 NLRP4Q96MN2 994 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 DDX25Q9UHL0 483 aaKnown RBP18.36■□□□□ 0.53
LIG1-205ENST00000593425 INPP5FQ9Y2H2 1132 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 NR2E1Q9Y466 385 aa18.36■□□□□ 0.53
LIG1-205ENST00000593425 CPLX1O14810 134 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms