RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 LACTB2Q53H82 288 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 FAM133BQ5BKY9 247 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 SMYD5Q6GMV2 418 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRIM72Q6ZMU5 477 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 OTUD6AQ7L8S5 288 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 IQCKQ8N0W5 287 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 RAPGEF5Q92565 580 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TNFRSF25Q93038 417 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ATP2A3Q93084 1043 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ALKBH8Q96BT7 664 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 ZBTB9Q96C00 473 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ZNF653Q96CK0 615 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 BORCS6Q96GS4 357 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 RBM41Q96IZ5 413 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 FAM84BQ96KN1 310 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 LRRC37BQ96QE4 947 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MPHOSPH6Q99547 160 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRAIPQ9BWF2 469 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ANO3Q9BYT9 981 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 AZI2Q9H6S1 392 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 VPS37BQ9H9H4 285 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 NOD2Q9HC29 1040 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 SERPINB13Q9UIV8 391 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 NAGPAQ9UK23 515 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TTC7AQ9ULT0 858 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 A0A087X0B3 334 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GOLGA8QA0A0J9YX86 632 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GOLGA8OA6NCC3 632 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 PP2D1A8MPX8 630 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GOLGA8NF8WBI6 632 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ABLIM1O14639 778 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 LIN7AO14910 233 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 MAP3K7O43318 606 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 BBOX1O75936 387 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 RPSAP08865 295 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 POLR2MP0CAP2 368 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 RARGP13631 454 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 POLR2BP30876 1174 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 PRKCIP41743 596 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CYP2J2P51589 502 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MARSP56192 900 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 PTENP60484 403 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CENPCQ03188 943 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ITGB3BPQ13352 177 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 HADHQ16836 314 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 MFSD14BQ5SR56 506 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ODR4Q5SWX8 454 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRAPPC3LQ5T215 181 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 EMC10Q5UCC4 262 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CHADLQ6NUI6 762 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 C11orf63Q6NUN7 778 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CCDC137Q6PK04 289 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 RNF207Q6ZRF8 634 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 C16orf86Q6ZW13 317 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CENPUQ71F23 418 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 APTXQ7Z2E3 356 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 APBB1IPQ7Z5R6 666 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 MCF2L2Q86YR7 1114 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRIM59Q8IWR1 403 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 EXOC8Q8IYI6 725 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MGARPQ8TDB4 240 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MS4A14Q96JA4 679 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 SEMA6BQ9H3T3 888 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 WHRNQ9P202 907 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 AMACRQ9UHK6 382 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MAD2L2Q9UI95 211 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 AGTPBP1Q9UPW5 1226 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 NUB1Q9Y5A7 615 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ZHX2Q9Y6X8 837 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 EXOC1LA0A1B0GW35 172 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 USP17L3A6NCW0 530 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 USP17L4A6NCW7 530 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 K7ENM7 598 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 KLRC4O43908 158 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ZNF189O75820 626 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 GLI1P08151 1106 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GSTA2P09210 222 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 PAEPP09466 180 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 NUDT17P0C025 328 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MNX1P50219 401 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 MXI1P50539 228 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 COPS2P61201 443 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 DEUP1Q05D60 604 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MYO1EQ12965 1108 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MAPK7Q13164 816 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 PABPC4Q13310 644 aaKnown RBP eCLIP3.79□□□□□ -1.8
VMP1-216ENST00000592790 KLHL38Q2WGJ6 581 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TTMPQ5BVD1 217 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 SLFN13Q68D06 897 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 DPP8Q6V1X1 898 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 USP17L1Q7RTZ2 530 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 JAMLQ86YT9 394 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TPH2Q8IWU9 490 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CDAN1Q8IWY9 1227 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TTC13Q8NBP0 860 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TATDN2Q93075 761 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GJA10Q969M2 543 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 HAUS1Q96CS2 278 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 OLFM3Q96PB7 478 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TGS1Q96RS0 853 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms