RNA–Protein interactions for RNA: ENST00000591880.2

GFAP-220, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-220ENST00000591880 ZNF174Q15697 407 aa12.35□□□□□ -0.43
GFAP-220ENST00000591880 LRRC43Q8N309 656 aa12.35□□□□□ -0.43
GFAP-220ENST00000591880 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
GFAP-220ENST00000591880 TRAIPQ9BWF2 469 aa12.35□□□□□ -0.43
GFAP-220ENST00000591880 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
GFAP-220ENST00000591880 TMEM117Q9H0C3 514 aa12.35□□□□□ -0.43
GFAP-220ENST00000591880 NLRC5Q86WI3 1866 aa12.35□□□□□ -0.43
GFAP-220ENST00000591880 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 A0A0U1RQF3 1178 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 TBKBP1A7MCY6 615 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 CD2BP2O95400 341 aaKnown RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 EOMESO95936 686 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 LINC00271P0C7V0 271 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 LAG3P18627 525 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 RPA1P27694 616 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 PRPHP41219 470 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 TECP42680 631 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 PHKA2P46019 1235 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 POU5F1BQ06416 359 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 PAN2Q504Q3 1202 aaKnown RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 MCTP1Q6DN14 999 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 CATSPER4Q7RTX7 472 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 NACC1Q96RE7 527 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 NSUN3Q9H649 340 aaKnown RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 DBR1Q9UK59 544 aaKnown RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 PIN4Q9Y237 131 aaKnown RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 PCDHB12Q9Y5F1 795 aa12.34□□□□□ -0.43
GFAP-220ENST00000591880 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
GFAP-220ENST00000591880 FSD2A1L4K1 749 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 NCK2O43639 380 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 ERLIN2O94905 339 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 PDCP20941 246 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 IBSPP21815 317 aaPredicted RBP12.33□□□□□ -0.44
GFAP-220ENST00000591880 AXLP30530 894 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 UBE3AQ05086 875 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 NCBP1Q09161 790 aaKnown RBP12.33□□□□□ -0.44
GFAP-220ENST00000591880 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 PDIA5Q14554 519 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 TWF2Q6IBS0 349 aaKnown RBP12.33□□□□□ -0.44
GFAP-220ENST00000591880 CATSPER3Q86XQ3 398 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 RNF149Q8NC42 400 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 PRPF31Q8WWY3 499 aaKnown RBP12.33□□□□□ -0.44
GFAP-220ENST00000591880 HLA-CQ95604 372 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 TMEM143Q96AN5 459 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 PGBD4Q96DM1 585 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 CCDC51Q96ER9 411 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.44
GFAP-220ENST00000591880 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 NFKBIZQ9BYH8 718 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 IFT122Q9HBG6 1241 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 AGPAT5Q9NUQ2 364 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 UNC80Q8N2C7 3258 aa12.33□□□□□ -0.44
GFAP-220ENST00000591880 DLL1O00548 723 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 USO1O60763 962 aaKnown RBP12.32□□□□□ -0.44
GFAP-220ENST00000591880 BMP15O95972 392 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 FGFR4P22455 802 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 PPM1AP35813 382 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 CUL4AQ13619 759 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 BRAPQ7Z569 592 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
GFAP-220ENST00000591880 KCTD17Q8N5Z5 321 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
GFAP-220ENST00000591880 CNNM3Q8NE01 707 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.32□□□□□ -0.44
GFAP-220ENST00000591880 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
GFAP-220ENST00000591880 FAM105AQ9NUU6 356 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 LRWD1Q9UFC0 647 aa12.32□□□□□ -0.44
GFAP-220ENST00000591880 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 MED24O75448 989 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 SRGAP2CP0DJJ0 459 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 FGFR1P11362 822 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
GFAP-220ENST00000591880 PTENP60484 403 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 PTGDRQ13258 359 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 FAM102BQ5T8I3 360 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 KRT79Q5XKE5 535 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 LARP1BQ659C4 914 aaKnown RBP12.31□□□□□ -0.44
GFAP-220ENST00000591880 PDE12Q6L8Q7 609 aaKnown RBP12.31□□□□□ -0.44
GFAP-220ENST00000591880 DTHD1Q6ZMT9 781 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
GFAP-220ENST00000591880 KSR1Q8IVT5 923 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 IGSF22Q8N9C0 903 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
GFAP-220ENST00000591880 PRDM6Q9NQX0 595 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 PCDHB6Q9Y5E3 794 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 CNTNAP2Q9UHC6 1331 aa12.31□□□□□ -0.44
GFAP-220ENST00000591880 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
GFAP-220ENST00000591880 FNDC1Q4ZHG4 1894 aaPredicted RBP12.3□□□□□ -0.44
GFAP-220ENST00000591880 RBAK-RBAKDNI3L0D1 243 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms