RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 PSMC6P62333 389 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 CTTNQ14247 550 aaKnown RBP11.58□□□□□ -0.56
ZNF540-208ENST00000589857 TERF2Q15554 542 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 NAB2Q15742 525 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 CLUL1Q15846 466 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 CFAP221Q4G0U5 840 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 DCAF17Q5H9S7 520 aaPredicted RBP11.58□□□□□ -0.56
ZNF540-208ENST00000589857 BEND6Q5SZJ8 279 aaPredicted RBP11.58□□□□□ -0.56
ZNF540-208ENST00000589857 KLHDC7AQ5VTJ3 777 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 TCERG1LQ5VWI1 586 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 HGSNATQ68CP4 663 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 C17orf99Q6UX52 265 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 ZNF771Q7L3S4 317 aaPredicted RBP11.58□□□□□ -0.56
ZNF540-208ENST00000589857 SLC9A9Q8IVB4 645 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 SYCE1Q8N0S2 351 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 TMEM174Q8WUU8 243 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 TAF4BQ92750 862 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 DRC1Q96MC2 740 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
ZNF540-208ENST00000589857 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 LXNQ9BS40 222 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.58□□□□□ -0.56
ZNF540-208ENST00000589857 UNC45AQ9H3U1 944 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 KCNG1Q9UIX4 513 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 EXOC7Q9UPT5 735 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 ASTN1O14525 1302 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 MYPNQ86TC9 1320 aa11.58□□□□□ -0.56
ZNF540-208ENST00000589857 A0A0A6YYK5 440 aaPredicted RBP11.57□□□□□ -0.56
ZNF540-208ENST00000589857 CCDC66A2RUB6 948 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 PDHXO00330 501 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 ENC1O14682 589 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 ZNF263O14978 683 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 MAPK13O15264 365 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 SEC31AO94979 1220 aaKnown RBP11.57□□□□□ -0.56
ZNF540-208ENST00000589857 MOCS3O95396 460 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 CCL5P13501 91 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 UCHL3P15374 230 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 SCP2P22307 547 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 KRT76Q01546 638 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 ODR4Q5SWX8 454 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 B3GNT9Q6UX72 402 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 FASTKD5Q7L8L6 764 aaKnown RBP11.57□□□□□ -0.56
ZNF540-208ENST00000589857 ZNF720Q7Z2F6 126 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 SYCP3Q8IZU3 236 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 ZKSCAN4Q969J2 545 aaPredicted RBP11.57□□□□□ -0.56
ZNF540-208ENST00000589857 HVCN1Q96D96 273 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 PKNOX2Q96KN3 472 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 OSBPL9Q96SU4 736 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 FGFBP2Q9BYJ0 223 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 UBXN6Q9BZV1 441 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 RGL1Q9NZL6 768 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 L1RE1Q9UN81 338 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 UBIAD1Q9Y5Z9 338 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 SNCAIPQ9Y6H5 919 aa11.57□□□□□ -0.56
ZNF540-208ENST00000589857 CXCL11O14625 94 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 MAFGO15525 162 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 AKAP3O75969 853 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 FARP2O94887 1054 aaPredicted RBP11.56□□□□□ -0.56
ZNF540-208ENST00000589857 ABL1P00519 1130 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 TFRCP02786 760 aaKnown RBP11.56□□□□□ -0.56
ZNF540-208ENST00000589857 PLEKP08567 350 aaPredicted RBP11.56□□□□□ -0.56
ZNF540-208ENST00000589857 OSBPP22059 807 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 PON1P27169 355 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 OAZ1P54368 228 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 VSNL1P62760 191 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 GFPT1Q06210 699 aaPredicted RBP11.56□□□□□ -0.56
ZNF540-208ENST00000589857 ZYXQ15942 572 aaKnown RBP11.56□□□□□ -0.56
ZNF540-208ENST00000589857 TKFCQ3LXA3 575 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 TAF3Q5VWG9 929 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 INTS8Q75QN2 995 aaKnown RBP11.56□□□□□ -0.56
ZNF540-208ENST00000589857 USP37Q86T82 979 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 NLRX1Q86UT6 975 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 C12orf56Q8IXR9 622 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 FAM133AQ8N9E0 248 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 FAM71BQ8TC56 605 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 PIGOQ8TEQ8 1089 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 SLC35C1Q96A29 364 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 CDHR1Q96JP9 859 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 PBKQ96KB5 322 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 CAPZA3Q96KX2 299 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 MMS19Q96T76 1030 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 SELENOOQ9BVL4 669 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 ARHGAP39Q9C0H5 1083 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 ABCB6Q9NP58 842 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 GCNT4Q9P109 453 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 CPA4Q9UI42 421 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 PCDHGC5Q9Y5F6 944 aa11.56□□□□□ -0.56
ZNF540-208ENST00000589857 MKI67P46013 3256 aaKnown RBP11.55□□□□□ -0.56
ZNF540-208ENST00000589857 WDR64B1ANS9 1081 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 H0YCG3 227 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 STAM2O75886 525 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 SGPL1O95470 568 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 TNFRSF8P28908 595 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 OAS2P29728 719 aaKnown RBP11.55□□□□□ -0.56
ZNF540-208ENST00000589857 QARSP47897 775 aaKnown RBP11.55□□□□□ -0.56
ZNF540-208ENST00000589857 CASP5P51878 434 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms