RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 CELF4Q9BZC1 486 aaKnown RBP23.56■■□□□ 1.36
R3HDM4-204ENST00000589428 TRIM9Q9C026 710 aa23.56■■□□□ 1.36
R3HDM4-204ENST00000589428 SUCLA2Q9P2R7 463 aaPredicted RBP23.56■■□□□ 1.36
R3HDM4-204ENST00000589428 MYMKA6NI61 221 aa23.55■■□□□ 1.36
R3HDM4-204ENST00000589428 CXCL10P02778 98 aa23.55■■□□□ 1.36
R3HDM4-204ENST00000589428 ZNF445P59923 1031 aa23.55■■□□□ 1.36
R3HDM4-204ENST00000589428 DRP2Q13474 957 aa23.55■■□□□ 1.36
R3HDM4-204ENST00000589428 SYT2Q8N9I0 419 aaPredicted RBP23.55■■□□□ 1.36
R3HDM4-204ENST00000589428 MYL1P05976 194 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 ACTN1P12814 892 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 CDC42EP1Q00587 391 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 MKRN4PQ13434 485 aaPredicted RBP23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 KIZQ2M2Z5 673 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 PADI6Q6TGC4 694 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 PSPC1Q8WXF1 523 aaKnown RBP23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 TMEM143Q96AN5 459 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 C7orf25Q9BPX7 421 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.54■■□□□ 1.362e-7■■□□□ 14.4
R3HDM4-204ENST00000589428 PRO3102Q9H379 93 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 SIP14410 1827 aa23.54■■□□□ 1.36
R3HDM4-204ENST00000589428 GHRP10912 638 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 NLRP11P59045 1033 aaKnown RBP23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 AMPD3Q01432 767 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 GPNMBQ14956 572 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 FBXO47Q5MNV8 452 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 NT5DC1Q5TFE4 455 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 ZNF365Q70YC5 407 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 GPBP1Q86WP2 473 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 RHPN2Q8IUC4 686 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 TDHQ8IZJ6 230 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 MCPH1Q8NEM0 835 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 FUCA2Q9BTY2 467 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 XPNPEP1Q9NQW7 623 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 COLQQ9Y215 455 aaPredicted RBP23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 FGBP02675 491 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 CYP11B2P19099 503 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 SARSP49591 514 aaKnown RBP23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 GPC3P51654 580 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 TMEM240Q5SV17 173 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 CNKSR3Q6P9H4 555 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 C16orf59Q7L2K0 433 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 USP38Q8NB14 1042 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 NLRP7Q8WX94 980 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 SMARCE1Q969G3 411 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 OSMRQ99650 979 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 MTIF3Q9H2K0 278 aaKnown RBP23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 COL4A3BPQ9Y5P4 624 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 SQORQ9Y6N5 450 aa23.53■■□□□ 1.36
R3HDM4-204ENST00000589428 GPR32O75388 356 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 SMC2O95347 1197 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 CRYBB1P53674 252 aaPredicted RBP23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 LPIN1Q14693 890 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 ARSHQ5FYA8 562 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 TSHZ1Q6ZSZ6 1077 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 SEPT8Q92599 483 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 VWCEQ96DN2 955 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 RUSC1Q9BVN2 902 aa23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 IFIH1Q9BYX4 1025 aaKnown RBP23.52■■□□□ 1.36
R3HDM4-204ENST00000589428 BIN1O00499 593 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 PLEKHG4Q58EX7 1191 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 C9orf50Q5SZB4 431 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 CNNM4Q6P4Q7 775 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 LRSAM1Q6UWE0 723 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 OTOP2Q7RTS6 562 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 DDX12PQ92771 950 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 RNPC3Q96LT9 517 aaKnown RBP23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 LRRC27Q9C0I9 530 aa23.51■■□□□ 1.35
R3HDM4-204ENST00000589428 A0A1W2PPC1 479 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 ASIC1P78348 528 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 TYRO3Q06418 890 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 SHHQ15465 462 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 SASS6Q6UVJ0 657 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 MAEAQ7L5Y9 396 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 DYMQ7RTS9 669 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 ZNF410Q86VK4 478 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 PRPF31Q8WWY3 499 aaKnown RBP23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 APBB2Q92870 758 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 DNAJC19Q96DA6 116 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 ZNF668Q96K58 619 aaPredicted RBP23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 NLRP4Q96MN2 994 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 MAN1B1Q9UKM7 699 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 NPHP3-ACAD11A0A0J9YXS1 232 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 KLRC4O43908 158 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 RPN1P04843 607 aaKnown RBP23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 PAK2Q13177 524 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 MXD4Q14582 209 aaPredicted RBP23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 FAM102BQ5T8I3 360 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 RINT1Q6NUQ1 792 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 DBF4BQ8NFT6 615 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 GSDMAQ96QA5 445 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 OSBPL7Q9BZF2 842 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 POLR3FQ9H1D9 316 aaPredicted RBP23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 ADAMTS10Q9H324 1103 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 CDHR5Q9HBB8 845 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 TET1Q8NFU7 2136 aa23.5■■□□□ 1.35
R3HDM4-204ENST00000589428 RANBP2P49792 3224 aaKnown RBP23.49■■□□□ 1.35
R3HDM4-204ENST00000589428 ZBBXA8MT70 800 aa23.49■■□□□ 1.35
R3HDM4-204ENST00000589428 ASAP2O43150 1006 aa23.49■■□□□ 1.35
R3HDM4-204ENST00000589428 RPS6KA5O75582 802 aa23.49■■□□□ 1.35
R3HDM4-204ENST00000589428 BAIAP3O94812 1187 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms