RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MAGEC2Q9UBF1 373 aaPredicted RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 H0YCG3 227 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 PDXKO00764 312 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 PPP1R37O75864 691 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 F2P00734 622 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 CCND3P30281 292 aaPredicted RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 FKBP3Q00688 224 aaKnown RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 MTFR1Q15390 333 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 IER5Q5VY09 327 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 CREBRFQ8IUR6 639 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 TYW1Q9NV66 732 aaKnown RBP24.5■■□□□ 1.51
ATG4D-209ENST00000588857 IFNKQ9P0W0 207 aa24.5■■□□□ 1.51
ATG4D-209ENST00000588857 IGKV6-21A0A0C4DH24 114 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 KCNJ18B7U540 433 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 MAGEB2O15479 319 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 CBFA2T2O43439 604 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 KPNA6O60684 536 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 DNM2P50570 870 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 GTF2BQ00403 316 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 KCNA1Q09470 495 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 PPFIA1Q13136 1202 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 KCNJ12Q14500 433 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 EDRF1Q3B7T1 1238 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 SYCP3Q8IZU3 236 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 ACCSQ96QU6 501 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 TMEM206Q9H813 350 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 TRAF3IP3Q9Y228 551 aa24.49■■□□□ 1.51
ATG4D-209ENST00000588857 ABCD1P33897 745 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 UBASH3AP57075 661 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 CHMP4BP1P59074 171 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 IRX5P78411 483 aaPredicted RBP24.48■■□□□ 1.51
ATG4D-209ENST00000588857 KIAA0753Q2KHM9 967 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 TCP11X2Q5H9J9 407 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 GNASQ5JWF2 1037 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 MAP3K21Q5TCX8 1036 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 KSR1Q8IVT5 923 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 METTL13Q8N6R0 699 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 TMEM161BQ8NDZ6 487 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 ASAP3Q8TDY4 903 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 PSPC1Q8WXF1 523 aaKnown RBP24.48■■□□□ 1.51
ATG4D-209ENST00000588857 HVCN1Q96D96 273 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 CTAGE1Q96RT6 745 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 KATNAL1Q9BW62 490 aa24.48■■□□□ 1.51
ATG4D-209ENST00000588857 UPF3AQ9H1J1 476 aaKnown RBP24.48■■□□□ 1.51
ATG4D-209ENST00000588857 ZEB2O60315 1214 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 C22orf31O95567 290 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 SCP2P22307 547 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 GLRA2P23416 452 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 EEF1GP26641 437 aaKnown RBP24.47■■□□□ 1.51
ATG4D-209ENST00000588857 KLRC1P26715 233 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 NAMPTP43490 491 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 MXD4Q14582 209 aaPredicted RBP24.47■■□□□ 1.51
ATG4D-209ENST00000588857 MFSD10Q14728 455 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 GRIK4Q16099 956 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 EFCAB12Q6NXP0 572 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 HS2ST1Q7LGA3 356 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 LRRC71Q8N4P6 559 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 DEPTORQ8TB45 409 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 PRPF31Q8WWY3 499 aaKnown RBP24.47■■□□□ 1.51
ATG4D-209ENST00000588857 KAT2BQ92831 832 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 EEF2KMTQ96G04 330 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 MRFAP1L1Q96HT8 127 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 KIFC3Q9BVG8 833 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 XPNPEP3Q9NQH7 507 aa24.47■■□□□ 1.51
ATG4D-209ENST00000588857 BRCA2P51587 3418 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 DENND3A2RUS2 1198 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 TPM3P06753 285 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 RPL13P26373 211 aaKnown RBP24.46■■□□□ 1.51
ATG4D-209ENST00000588857 IRF2BP1Q8IU81 584 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 GOLGA5Q8TBA6 731 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 PDLIM2Q96JY6 352 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 CEP63Q96MT8 703 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 PPP1R9BQ96SB3 815 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 XPO4Q9C0E2 1151 aaKnown RBP24.46■■□□□ 1.51
ATG4D-209ENST00000588857 GBP3Q9H0R5 595 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 SUCLA2Q9P2R7 463 aaPredicted RBP24.46■■□□□ 1.51
ATG4D-209ENST00000588857 EXOC7Q9UPT5 735 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 ZMYM2Q9UBW7 1377 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 RRN3P2A6NIE6 340 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 LRRIQ4A6NIV6 560 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 PGK1P00558 417 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 INHAP05111 366 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 CCL5P13501 91 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 EN2P19622 333 aaPredicted RBP24.46■■□□□ 1.51
ATG4D-209ENST00000588857 PSEN2P49810 448 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 LRRC55Q6ZSA7 311 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 LIMA1Q9UHB6 759 aaKnown RBP24.46■■□□□ 1.51
ATG4D-209ENST00000588857 TBX20Q9UMR3 447 aa24.46■■□□□ 1.51
ATG4D-209ENST00000588857 CETN3O15182 167 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 TGFB1I1O43294 461 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 TMOD1P28289 359 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 NKX3-2P78367 333 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 PURAQ00577 322 aaKnown RBP24.45■■□□□ 1.5
ATG4D-209ENST00000588857 MKRN4PQ13434 485 aaPredicted RBP24.45■■□□□ 1.5
ATG4D-209ENST00000588857 ADAM9Q13443 819 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 DRP2Q13474 957 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 FILIP1LQ4L180 1135 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 MTHFD1LQ6UB35 978 aa24.45■■□□□ 1.5
ATG4D-209ENST00000588857 CNOT6LQ96LI5 555 aaKnown RBP24.45■■□□□ 1.5
ATG4D-209ENST00000588857 ARHGAP28Q9P2N2 729 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms