RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ZNF577Q9BSK1 485 aa24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 MTA3Q9BTC8 594 aa24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 EMILIN2Q9BXX0 1053 aa24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 IGSF9Q9P2J2 1179 aa24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 CA14Q9ULX7 337 aa24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 CARNS1A5YM72 827 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 SMCO2A6NFE2 343 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 CHMLP26374 656 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 SREBF1P36956 1147 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 CACNA1BQ00975 2339 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 LETM2Q2VYF4 491 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 ZC3H14Q6PJT7 736 aaKnown RBP24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 NIPA1Q7RTP0 329 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 ZNF598Q86UK7 904 aaKnown RBP24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 ZNF710Q8N1W2 664 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 FAM167AQ96KS9 214 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 MAFBQ9Y5Q3 323 aaPredicted RBP24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 RBM8AQ9Y5S9 174 aaKnown RBP24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 IRAK3Q9Y616 596 aa24.65■■□□□ 1.54
CAPNS1-205ENST00000588780 ZNF292O60281 2723 aa24.64■■□□□ 1.54
CAPNS1-205ENST00000588780 DARSP14868 501 aaKnown RBP24.64■■□□□ 1.54
CAPNS1-205ENST00000588780 AP3B2Q13367 1082 aa24.64■■□□□ 1.54
CAPNS1-205ENST00000588780 AAMPQ13685 434 aa24.64■■□□□ 1.54
CAPNS1-205ENST00000588780 GLB1LQ6UWU2 654 aa24.64■■□□□ 1.54
CAPNS1-205ENST00000588780 PCDHA10Q9Y5I2 948 aa24.64■■□□□ 1.54
CAPNS1-205ENST00000588780 WDR87Q6ZQQ6 2873 aa24.64■■□□□ 1.53
CAPNS1-205ENST00000588780 MYH9P35579 1960 aaKnown RBP24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 FAM86B1E9PN63 330 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 DHX15O43143 795 aaKnown RBP24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 FAM86B2P0C5J1 330 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 GSPT1P15170 499 aaKnown RBP24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 GPC3P51654 580 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 TTC22Q5TAA0 569 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 JAKMIP3Q5VZ66 844 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 TWF2Q6IBS0 349 aaKnown RBP24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 ZNF746Q6NUN9 644 aaPredicted RBP24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 PPP1R18Q6NYC8 613 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 RSAD2Q8WXG1 361 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 LPPQ93052 612 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 LRRC2Q9BYS8 371 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 TBC1D17Q9HA65 648 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 TBC1D22BQ9NU19 505 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 WNT16Q9UBV4 365 aa24.63■■□□□ 1.53
CAPNS1-205ENST00000588780 CSDE1O75534 798 aaKnown RBP24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 LIFRP42702 1097 aa24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 PTPN14Q15678 1187 aa24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 TYW1BQ6NUM6 668 aa24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 SMAP1Q8IYB5 467 aaPredicted RBP24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 RUBCNQ92622 972 aa24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 NRDE2Q9H7Z3 1164 aa24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 NRBP2Q9NSY0 501 aa24.62■■□□□ 1.53
CAPNS1-205ENST00000588780 NCOR2Q9Y618 2525 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 KRBA1A5PL33 1030 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 GALTP07902 379 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 TBC1D8BQ0IIM8 1120 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 NOMO2Q5JPE7 1267 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 BCL7CQ8WUZ0 217 aaPredicted RBP24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 MAP4K1Q92918 833 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 KLHL5Q96PQ7 755 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 GCOM2Q9BZD3 368 aaPredicted RBP24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 GLT8D2Q9H1C3 349 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 TBC1D13Q9NVG8 400 aa24.61■■□□□ 1.53
CAPNS1-205ENST00000588780 SGSM2O43147 1006 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 DCNP07585 359 aaKnown RBP24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 PHKA2P46019 1235 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 CLCN4P51793 760 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 C15orf39Q6ZRI6 1047 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 TEX2Q8IWB9 1127 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 DCLK2Q8N568 766 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 RSPH1Q8WYR4 309 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 STAMQ92783 540 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 V9GY48 417 aaPredicted RBP24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 DENND4AQ7Z401 1863 aa24.6■■□□□ 1.53
CAPNS1-205ENST00000588780 OATP04181 439 aa24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 MYBP10242 640 aa24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 SKIP12755 728 aa24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 ELMSAN1Q6PJG2 1045 aa24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 CHST12Q9NRB3 414 aa24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 MRPL17Q9NRX2 175 aaKnown RBP24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 RBM28Q9NW13 759 aaKnown RBP24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 DNAJB4Q9UDY4 337 aa24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 PIN4Q9Y237 131 aaKnown RBP24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 CNTNAP5Q8WYK1 1306 aa24.59■■□□□ 1.53
CAPNS1-205ENST00000588780 C2CD2LO14523 706 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 KRT37O76014 449 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 CNPP09543 421 aaKnown RBP24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 SFPQP23246 707 aaKnown RBP eCLIP24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 SLC11A1P49279 550 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 SETQ01105 290 aaPredicted RBP24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 LINC01465Q8N7H1 131 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 URGCPQ8TCY9 931 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 CNTNAP3BQ96NU0 1288 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 FAM193BQ96PV7 902 aaPredicted RBP24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 CNTNAP3Q9BZ76 1288 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 MAN1C1Q9NR34 630 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 SIT1Q9Y3P8 196 aa24.58■■□□□ 1.53
CAPNS1-205ENST00000588780 IGLV3-22A0A075B6J6 115 aa24.57■■□□□ 1.52
CAPNS1-205ENST00000588780 CCDC195A0A1B0GUA6 201 aa24.57■■□□□ 1.52
CAPNS1-205ENST00000588780 SP9P0CG40 484 aa24.57■■□□□ 1.52
CAPNS1-205ENST00000588780 PRKCEQ02156 737 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms