RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 LINC00271P0C7V0 271 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 FGFR1P11362 822 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 SKIP12755 728 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 LAG3P18627 525 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 U2AF2P26368 475 aaKnown RBP eCLIP20.89■□□□□ 0.93
ATG4D-203ENST00000585752 TRAPPC10P48553 1259 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 DSC3Q14574 896 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 ANO5Q75V66 913 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 TPH2Q8IWU9 490 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 SPPL3Q8TCT6 385 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 NLRP4Q96MN2 994 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 FDXACB1Q9BRP7 624 aaPredicted RBP20.89■□□□□ 0.93
ATG4D-203ENST00000585752 LXNQ9BS40 222 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 TMEM117Q9H0C3 514 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 ZSWIM4Q9H7M6 989 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 CHST12Q9NRB3 414 aa20.89■□□□□ 0.93
ATG4D-203ENST00000585752 TYW1Q9NV66 732 aaKnown RBP20.89■□□□□ 0.93
ATG4D-203ENST00000585752 H3BQ06 376 aaPredicted RBP20.88■□□□□ 0.93
ATG4D-203ENST00000585752 ITGB1P05556 798 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 FGFR4P22455 802 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 SSTR3P32745 418 aaPredicted RBP20.88■□□□□ 0.93
ATG4D-203ENST00000585752 MCM7P33993 719 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 RFC5P40937 340 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 FAM189BP81408 668 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 XKR9Q5GH70 373 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 TTC38Q5R3I4 469 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 TWF2Q6IBS0 349 aaKnown RBP20.88■□□□□ 0.93
ATG4D-203ENST00000585752 SPRYD3Q8NCJ5 442 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 TCP11Q8WWU5 503 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 HAS1Q92839 578 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 DYDC2Q96IM9 177 aa20.88■□□□□ 0.93
ATG4D-203ENST00000585752 PUF60Q9UHX1 559 aaKnown RBP20.88■□□□□ 0.93
ATG4D-203ENST00000585752 IGKV6-21A0A0C4DH24 114 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 GAS2O43903 313 aaKnown RBP20.87■□□□□ 0.93
ATG4D-203ENST00000585752 EOMESO95936 686 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 YWHABP31946 246 aaKnown RBP20.87■□□□□ 0.93
ATG4D-203ENST00000585752 CYP4A11Q02928 519 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 UBE3AQ05086 875 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 ORC2Q13416 577 aaPredicted RBP20.87■□□□□ 0.93
ATG4D-203ENST00000585752 DRP2Q13474 957 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 CTTNQ14247 550 aaKnown RBP20.87■□□□□ 0.93
ATG4D-203ENST00000585752 CATSPER4Q7RTX7 472 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 ECHDC2Q86YB7 292 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 C4orf19Q8IY42 314 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.87■□□□□ 0.93
ATG4D-203ENST00000585752 ARID2Q68CP9 1835 aa20.87■□□□□ 0.93
ATG4D-203ENST00000585752 CSDE1O75534 798 aaKnown RBP20.86■□□□□ 0.93
ATG4D-203ENST00000585752 STBD1O95210 358 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 TXKP42681 527 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 NDUFV1P49821 464 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 NPEPPSP55786 919 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 KRT17Q04695 432 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 ZNF174Q15697 407 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 LRRC43Q8N309 656 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 COLGALT1Q8NBJ5 622 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 NEK9Q8TD19 979 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 PSPC1Q8WXF1 523 aaKnown RBP20.86■□□□□ 0.93
ATG4D-203ENST00000585752 MTRQ99707 1265 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 TTC12Q9H892 705 aaPredicted RBP20.86■□□□□ 0.93
ATG4D-203ENST00000585752 PIN4Q9Y237 131 aaKnown RBP20.86■□□□□ 0.93
ATG4D-203ENST00000585752 COL4A3BPQ9Y5P4 624 aa20.86■□□□□ 0.93
ATG4D-203ENST00000585752 MYO7AQ13402 2215 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 A0A0U1RQF3 1178 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 ASAP2O43150 1006 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 FGF18O76093 207 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 SRGAP2CP0DJJ0 459 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 PDIA4P13667 645 aaKnown RBP20.85■□□□□ 0.93
ATG4D-203ENST00000585752 SYT1P21579 422 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 HYAL1Q12794 435 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 RILPL1Q5EBL4 403 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 BRAPQ7Z569 592 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 MRPL9Q9BYD2 267 aaKnown RBP20.85■□□□□ 0.93
ATG4D-203ENST00000585752 TLR9Q9NR96 1032 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 BMP2KQ9NSY1 1161 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-203ENST00000585752 RGL1Q9NZL6 768 aa20.85■□□□□ 0.93
ATG4D-203ENST00000585752 GRXCR2A6NFK2 248 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 IL9P15248 144 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 PPM1AP35813 382 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 NCBP1Q09161 790 aaKnown RBP20.84■□□□□ 0.93
ATG4D-203ENST00000585752 BMS1Q14692 1282 aaKnown RBP20.84■□□□□ 0.93
ATG4D-203ENST00000585752 PDE12Q6L8Q7 609 aaKnown RBP20.84■□□□□ 0.93
ATG4D-203ENST00000585752 KSR1Q8IVT5 923 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 TMEM143Q96AN5 459 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 ZNF558Q96NG5 402 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 CASD1Q96PB1 797 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 CEP89Q96ST8 783 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 EIF2AK1Q9BQI3 630 aaKnown RBP20.84■□□□□ 0.93
ATG4D-203ENST00000585752 C1QTNF1Q9BXJ1 281 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 TLE6Q9H808 572 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 BRWD1Q9NSI6 2320 aa20.84■□□□□ 0.93
ATG4D-203ENST00000585752 VCANP13611 3396 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 FSD2A1L4K1 749 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 STX6O43752 255 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 SRGAP2BP0DMP2 458 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 NRIP1P48552 1158 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 RAB27AP51159 221 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 EMC2Q15006 297 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 CLUL1Q15846 466 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 SRGAP1Q7Z6B7 1085 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 RBM23Q86U06 439 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms