RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	TRAF5	O00463	557 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	PLD2	O14939	933 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	GLRX3	O76003	335 aa	Known RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	MAN2A2	P49641	1150 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	KIF11	P52732	1056 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	RABGGTB	P53611	331 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	NANOS3	P60323	173 aa	Known RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	CNGB1	Q14028	1251 aa	Predicted RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	ELAVL1	Q15717	326 aa	Known RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	SLFN12L	Q6IEE8	588 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	BMP8A	Q7Z5Y6	402 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	CLEC14A	Q86T13	490 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	DDX53	Q86TM3	631 aa	Known RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	CHST14	Q8NCH0	376 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	C16orf92	Q96LL3	132 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	IL23A	Q9NPF7	189 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	ACSS2	Q9NR19	701 aa		4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	REXO2	Q9Y3B8	237 aa	Known RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	URB2	Q14146	1524 aa	Known RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	ZNF608	Q9ULD9	1512 aa	Predicted RBP	4.39	□□□□□ -1.71
VAPA-208	ENST00000584796	WIZ	O95785	1651 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	UBA6	A0AVT1	1052 aa	Predicted RBP	4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	UBE2QL1	A1L167	161 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	KLRG2	A4D1S0	409 aa	Predicted RBP	4.38	□□□□□ -1.71
VAPA-208	ENST00000584796		B4E1Z4	1266 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	KRT37	O76014	449 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	VSIG10L2	P0DP72	767 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	COL10A1	Q03692	680 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	TTC38	Q5R3I4	469 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	ZNF662	Q6ZS27	426 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	DYDC2	Q96IM9	177 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	WDR92	Q96MX6	357 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	TCF25	Q9BQ70	676 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	SAMD15	Q9P1V8	674 aa		4.38	□□□□□ -1.71
VAPA-208	ENST00000584796	FOXN1	O15353	648 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	RAMP2	O60895	175 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	TOX4	O94842	621 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	RAPGEF3	O95398	923 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	CYP17A1	P05093	508 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	IGFALS	P35858	605 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	SMAD3	P84022	425 aa	Known RBP	4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	EPHA7	Q15375	998 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	FNDC3B	Q53EP0	1204 aa	Known RBP	4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	SOGA3	Q5TF21	947 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	C1QL3	Q5VWW1	255 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	NME9	Q86XW9	330 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	GSPT2	Q8IYD1	628 aa	Known RBP	4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	RPUSD2	Q8IZ73	545 aa	Known RBP	4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	LILRB2	Q8N423	598 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	PLA2G15	Q8NCC3	412 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	CLUHP3	Q96NS8	147 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	GPR87	Q9BY21	358 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	PCIF1	Q9H4Z3	704 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	XDH	P47989	1333 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	PRDM2	Q13029	1718 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	PDS5B	Q9NTI5	1447 aa		4.37	□□□□□ -1.71
VAPA-208	ENST00000584796	EIF4G3	O43432	1585 aa	Known RBP	4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	PTPDC1	A2A3K4	754 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	GOLGA8B	A8MQT2	603 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	MTSS1	O43312	755 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	DNAJC8	O75937	253 aa	Predicted RBP	4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	ASL	P04424	464 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	JUN	P05412	331 aa	Known RBP	4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	TGM1	P22735	817 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	PTGS2	P35354	604 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	BCAR1	P56945	870 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	MYBPC3	Q14896	1274 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	FKBP15	Q5T1M5	1219 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	PRAMEF9	Q5VWM5	478 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	MFSD5	Q6N075	450 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	RHOU	Q7L0Q8	258 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	KANSL1	Q7Z3B3	1105 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	MRGPRE	Q86SM8	312 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	KIAA1958	Q8N8K9	716 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	TTPAL	Q9BTX7	342 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	TRPS1	Q9UHF7	1281 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	CEP164	Q9UPV0	1460 aa		4.36	□□□□□ -1.71
VAPA-208	ENST00000584796	TMEM191C	A6NGB0	347 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	GRXCR1	A8MXD5	290 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796		H7C1D1	291 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	PTX3	P26022	381 aa	Predicted RBP	4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	ZNF460	Q14592	562 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	RABL3	Q5HYI8	236 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	CREB3L3	Q68CJ9	461 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	NAIF1	Q69YI7	327 aa	Predicted RBP	4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	ESRP1	Q6NXG1	681 aa	Known RBP	4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	DNAJC10	Q8IXB1	793 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	MDGA1	Q8NFP4	955 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	RPGR	Q92834	1020 aa	Known RBP	4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	LENG9	Q96B70	501 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	ZG16B	Q96DA0	208 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	ZNF512	Q96ME7	567 aa	Predicted RBP	4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	TUBGCP5	Q96RT8	1024 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	MNT	Q99583	582 aa		4.35	□□□□□ -1.71
VAPA-208	ENST00000584796	NRDE2	Q9H7Z3	1164 aa		4.35	□□□□□ -1.71

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