RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 PPME1Q9Y570 386 aa23.15■■□□□ 1.3
TOP3A-218ENST00000584669 ATG2AQ2TAZ0 1938 aa23.15■■□□□ 1.3
TOP3A-218ENST00000584669 A0A087WZ62 844 aa23.14■■□□□ 1.29
TOP3A-218ENST00000584669 H3BQ06 376 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-218ENST00000584669 GRM6O15303 877 aa23.14■■□□□ 1.29
TOP3A-218ENST00000584669 CSDE1O75534 798 aaKnown RBP23.14■■□□□ 1.29
TOP3A-218ENST00000584669 DARSP14868 501 aaKnown RBP23.14■■□□□ 1.29
TOP3A-218ENST00000584669 FXR2P51116 673 aaKnown RBP eCLIP23.14■■□□□ 1.29
TOP3A-218ENST00000584669 RILPL1Q5EBL4 403 aa23.14■■□□□ 1.29
TOP3A-218ENST00000584669 ZNF689Q96CS4 500 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-218ENST00000584669 FDXACB1Q9BRP7 624 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-218ENST00000584669 TUFT1Q9NNX1 390 aa23.14■■□□□ 1.29
TOP3A-218ENST00000584669 ANKEF1Q9NU02 776 aa23.14■■□□□ 1.29
TOP3A-218ENST00000584669 MRPL42Q9Y6G3 142 aaKnown RBP23.14■■□□□ 1.29
TOP3A-218ENST00000584669 VPS37CA5D8V6 355 aaPredicted RBP23.13■■□□□ 1.29
TOP3A-218ENST00000584669 C5orf67F2Z3F1 127 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 LINC00271P0C7V0 271 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 RARRES1P49788 294 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 GATMP50440 423 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 DSC3Q14574 896 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 IL17AQ16552 155 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 PTCRAQ6ISU1 281 aaPredicted RBP23.13■■□□□ 1.29
TOP3A-218ENST00000584669 POTEGQ6S5H5 508 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 CMTR2Q8IYT2 770 aaKnown RBP23.13■■□□□ 1.29
TOP3A-218ENST00000584669 CRIPAKQ8N1N5 446 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 CLP1Q92989 425 aaKnown RBP23.13■■□□□ 1.29
TOP3A-218ENST00000584669 NLRP4Q96MN2 994 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 POLR3CQ9BUI4 534 aaPredicted RBP23.13■■□□□ 1.29
TOP3A-218ENST00000584669 XPNPEP1Q9NQW7 623 aa23.13■■□□□ 1.29
TOP3A-218ENST00000584669 DENND3A2RUS2 1198 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 EXOC8Q8IYI6 725 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.12■■□□□ 1.29
TOP3A-218ENST00000584669 ERMNQ8TAM6 284 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 PRPF31Q8WWY3 499 aaKnown RBP23.12■■□□□ 1.29
TOP3A-218ENST00000584669 SNX21Q969T3 373 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 INTS4Q96HW7 963 aaKnown RBP23.12■■□□□ 1.29
TOP3A-218ENST00000584669 MTRQ99707 1265 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 GCOM2Q9BZD3 368 aaPredicted RBP23.12■■□□□ 1.29
TOP3A-218ENST00000584669 LMAN2LQ9H0V9 348 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 RGS18Q9NS28 235 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 CLDND1Q9NY35 253 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 RAPGEFL1Q9UHV5 662 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 COL4A3BPQ9Y5P4 624 aa23.12■■□□□ 1.29
TOP3A-218ENST00000584669 C9IYK1 514 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 LAD1O00515 517 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 IL9P15248 144 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 RPA1P27694 616 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 SARSP49591 514 aaKnown RBP23.11■■□□□ 1.29
TOP3A-218ENST00000584669 CDC42EP1Q00587 391 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 FERMT3Q86UX7 667 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 ZNF410Q86VK4 478 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 PSPC1Q8WXF1 523 aaKnown RBP23.11■■□□□ 1.29
TOP3A-218ENST00000584669 PABPC5Q96DU9 382 aaKnown RBP23.11■■□□□ 1.29
TOP3A-218ENST00000584669 CCDC43Q96MW1 224 aaKnown RBP23.11■■□□□ 1.29
TOP3A-218ENST00000584669 C1QTNF1Q9BXJ1 281 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 EPHX3Q9H6B9 360 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 ALG13Q9NP73 1137 aaKnown RBP23.11■■□□□ 1.29
TOP3A-218ENST00000584669 LRWD1Q9UFC0 647 aa23.11■■□□□ 1.29
TOP3A-218ENST00000584669 MYH11P35749 1972 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 PP2D1A8MPX8 630 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 GAS2O43903 313 aaKnown RBP23.1■■□□□ 1.29
TOP3A-218ENST00000584669 XRCC6P12956 609 aaKnown RBP eCLIP23.1■■□□□ 1.29
TOP3A-218ENST00000584669 SSTR3P32745 418 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-218ENST00000584669 PRPHP41219 470 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 ATP2C1P98194 919 aaPredicted RBP23.1■■□□□ 1.29
TOP3A-218ENST00000584669 LAMTOR4Q0VGL1 99 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 ECM1Q16610 540 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 IGSF22Q8N9C0 903 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 TCP11Q8WWU5 503 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 PLVAPQ9BX97 442 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 IFT122Q9HBG6 1241 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 C1orf112Q9NSG2 853 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 PCDHB7Q9Y5E2 793 aa23.1■■□□□ 1.29
TOP3A-218ENST00000584669 SRGAP2CP0DJJ0 459 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 PDCP20941 246 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 SYT1P21579 422 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 CCT6AP40227 531 aaKnown RBP23.09■■□□□ 1.29
TOP3A-218ENST00000584669 PDIA5Q14554 519 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 SPOUT1Q5T280 376 aaKnown RBP23.09■■□□□ 1.29
TOP3A-218ENST00000584669 DTHD1Q6ZMT9 781 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 SLC24A5Q71RS6 500 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 NACC1Q96RE7 527 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 IGFLR1Q9H665 355 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 ATP6V0A4Q9HBG4 840 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 CD320Q9NPF0 282 aa23.09■■□□□ 1.29
TOP3A-218ENST00000584669 USO1O60763 962 aaKnown RBP23.08■■□□□ 1.29
TOP3A-218ENST00000584669 DGAT1O75907 488 aa23.08■■□□□ 1.29
TOP3A-218ENST00000584669 CDC25AP30304 524 aa23.08■■□□□ 1.29
TOP3A-218ENST00000584669 PUS10Q3MIT2 529 aaKnown RBP23.08■■□□□ 1.29
TOP3A-218ENST00000584669 HAUS3Q68CZ6 603 aa23.08■■□□□ 1.29
TOP3A-218ENST00000584669 FAM43BQ6ZT52 329 aaPredicted RBP23.08■■□□□ 1.29
TOP3A-218ENST00000584669 BRAPQ7Z569 592 aa23.08■■□□□ 1.29
TOP3A-218ENST00000584669 RAB34Q9BZG1 259 aa23.08■■□□□ 1.29
TOP3A-218ENST00000584669 DBR1Q9UK59 544 aaKnown RBP23.08■■□□□ 1.29
TOP3A-218ENST00000584669 PLAGL2Q9UPG8 496 aa23.08■■□□□ 1.29
TOP3A-218ENST00000584669 PLXNA4Q9HCM2 1894 aa23.08■■□□□ 1.29
TOP3A-218ENST00000584669 GRXCR2A6NFK2 248 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 TBKBP1A7MCY6 615 aa23.07■■□□□ 1.28
TOP3A-218ENST00000584669 ZSCAN20P17040 1043 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-218ENST00000584669 HYAL1Q12794 435 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms