RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 INHBCP55103 352 aa6.1□□□□□ -1.43
SMCHD1-208ENST00000583344 CNGB1Q14028 1251 aaPredicted RBP6.1□□□□□ -1.43
SMCHD1-208ENST00000583344 SF3A1Q15459 793 aaKnown RBP6.1□□□□□ -1.43
SMCHD1-208ENST00000583344 ZNF174Q15697 407 aa6.1□□□□□ -1.43
SMCHD1-208ENST00000583344 PLA2G15Q8NCC3 412 aa6.1□□□□□ -1.43
SMCHD1-208ENST00000583344 WDR92Q96MX6 357 aa6.1□□□□□ -1.43
SMCHD1-208ENST00000583344 CBX4O00257 560 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 PPP1R12AO14974 1030 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 RPS6KA4O75676 772 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 CYP17A1P05093 508 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 JMJD7P0C870 316 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 MAN2A2P49641 1150 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 INHBEP58166 350 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 EPHA7Q15375 998 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 SMN1Q16637 294 aaKnown RBP6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 CREB3L3Q68CJ9 461 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 KRT40Q6A162 431 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 BMP8AQ7Z5Y6 402 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 ELF4Q99607 663 aaPredicted RBP6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 TCF25Q9BQ70 676 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 NCDNQ9UBB6 729 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 B4GALT6Q9UBX8 382 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 RCAN3Q9UKA8 241 aa6.09□□□□□ -1.43
SMCHD1-208ENST00000583344 VSIG10L2P0DP72 767 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 TOB2Q14106 344 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 GAGE13Q4V321 117 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 FKBP15Q5T1M5 1219 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 MB21D1Q8N884 522 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 RPGRQ92834 1020 aaKnown RBP6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 PGBD4Q96DM1 585 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 GPR87Q9BY21 358 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 HAPLN2Q9GZV7 340 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 GPRC5BQ9NZH0 403 aa6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 H2AFY2Q9P0M6 372 aaPredicted RBP6.08□□□□□ -1.44
SMCHD1-208ENST00000583344 FAM20BO75063 409 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 APOL3O95236 402 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 RABGGTBP53611 331 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 BCAR1P56945 870 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 ADCY2Q08462 1091 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 CDCA2Q69YH5 1023 aaPredicted RBP6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 UNQ6494/PRO21346Q6UXR6 183 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 Q6ZPA2 131 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 NME9Q86XW9 330 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 GSPT2Q8IYD1 628 aaKnown RBP6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 C7orf31Q8N865 590 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 POFUT1Q9H488 388 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 MTG2Q9H4K7 406 aa6.07□□□□□ -1.44
SMCHD1-208ENST00000583344 KLRG2A4D1S0 409 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 STC2O76061 302 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 KRT4P19013 534 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 PCSK4Q6UW60 755 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 NPM2Q86SE8 214 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 MRGPRGQ86SM5 289 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 SH3TC2Q8TF17 1288 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 ATXN2LQ8WWM7 1075 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 RTF1Q92541 710 aaKnown RBP6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 MYL10Q9BUA6 226 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 PITHD1Q9GZP4 211 aaPredicted RBP6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 TOMM22Q9NS69 142 aa6.06□□□□□ -1.44
SMCHD1-208ENST00000583344 PRPF6O94906 941 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 ASMTLO95671 621 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 PEX11BO96011 259 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 JUNP05412 331 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 CFAP100Q494V2 611 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 C1QL3Q5VWW1 255 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 UBE2R2Q712K3 238 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 KANSL1Q7Z3B3 1105 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 PHYKPLQ8IUZ5 450 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 ARL8AQ96BM9 186 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 ZNF512Q96ME7 567 aaPredicted RBP6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 AGAP2Q99490 1192 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 NRDE2Q9H7Z3 1164 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 C14orf93Q9H972 538 aaKnown RBP6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 OXSMQ9NWU1 459 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 SPO11Q9Y5K1 396 aa6.05□□□□□ -1.44
SMCHD1-208ENST00000583344 XDHP47989 1333 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 A0A0A6YYJ9 748 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 A0A0A6YYK5 440 aaPredicted RBP6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 DAPK3O43293 454 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 OPHN1O60890 802 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 FLT3P36888 993 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 SMAD3P84022 425 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 PURAQ00577 322 aaKnown RBP6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 ADCY1Q08828 1119 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 PABPC4Q13310 644 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 FAM214AQ32MH5 1076 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 ZNF662Q6ZS27 426 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 MRFAP1L1Q96HT8 127 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 MNTQ99583 582 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 SOX7Q9BT81 388 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 TTPALQ9BTX7 342 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 ZMAT4Q9H898 229 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 DMRT1Q9Y5R6 373 aa6.04□□□□□ -1.44
SMCHD1-208ENST00000583344 ATP2A2P16615 1042 aaKnown RBP6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 KIR2DL3P43628 341 aa6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 SPIDRQ14159 915 aa6.03□□□□□ -1.44
SMCHD1-208ENST00000583344 MFSD5Q6N075 450 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms