RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 PPP2R3CQ969Q6 453 aa14.05□□□□□ -0.16
CDK5RAP3-222ENST00000581708 FDXACB1Q9BRP7 624 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-222ENST00000581708 POLR3CQ9BUI4 534 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-222ENST00000581708 PLAGL2Q9UPG8 496 aa14.05□□□□□ -0.16
CDK5RAP3-222ENST00000581708 PCDHB12Q9Y5F1 795 aa14.05□□□□□ -0.16
CDK5RAP3-222ENST00000581708 BRWD1Q9NSI6 2320 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 LAD1O00515 517 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 ZNF623O75123 536 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 BMP1P13497 986 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 RAB27AP51159 221 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 FOSBP53539 338 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 CYP4A11Q02928 519 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 CTTNQ14247 550 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 EMC2Q15006 297 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 PUS10Q3MIT2 529 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 TTC38Q5R3I4 469 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 ABI1Q8IZP0 508 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 TMX3Q96JJ7 454 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 MTRQ99707 1265 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 SH2D3AQ9BRG2 576 aa14.04□□□□□ -0.16
CDK5RAP3-222ENST00000581708 VCANP13611 3396 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 FSD2A1L4K1 749 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 TBKBP1A7MCY6 615 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 WNT7AO00755 349 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 LAG3P18627 525 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 RPA1P27694 616 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 RARRES1P49788 294 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 FXR2P51116 673 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 TFDP1Q14186 410 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 PDIA5Q14554 519 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 HAUS3Q68CZ6 603 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 ZNF598Q86UK7 904 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 FERMT3Q86UX7 667 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 PABPC5Q96DU9 382 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 NLRP4Q96MN2 994 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 CCDC43Q96MW1 224 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 NACC1Q96RE7 527 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 MRPL9Q9BYD2 267 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 NFKBIZQ9BYH8 718 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 RAB34Q9BZG1 259 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 TMEM60Q9H2L4 133 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 UBE2ZQ9H832 354 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 IFT122Q9HBG6 1241 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 DBR1Q9UK59 544 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 LZTS1Q9Y250 596 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 ARID2Q68CP9 1835 aa14.03□□□□□ -0.16
CDK5RAP3-222ENST00000581708 GRM6O15303 877 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 ATP2B1P20020 1258 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 AXLP30530 894 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 PPM1AP35813 382 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 PHKA2P46019 1235 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 NCBP1Q09161 790 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 LEXMQ3ZCV2 418 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 PAN2Q504Q3 1202 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 FAM102BQ5T8I3 360 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 CATSPER4Q7RTX7 472 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 LRRC43Q8N309 656 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 MCPH1Q8NEM0 835 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 SPPL3Q8TCT6 385 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 ADAMTS19Q8TE59 1207 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 PGBD4Q96DM1 585 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 CCDC51Q96ER9 411 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 CASD1Q96PB1 797 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 AGPAT5Q9NUQ2 364 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 XIRP2A4UGR9 3374 aa14.02□□□□□ -0.17
CDK5RAP3-222ENST00000581708 POTEMA6NI47 508 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 RBAK-RBAKDNI3L0D1 243 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 ITGB1P05556 798 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 SPATA31C1P0DKV0 1188 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 FGFR1P11362 822 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 PRPHP41219 470 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 TECP42680 631 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 PLCB3Q01970 1234 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 TFF2Q03403 129 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 ZNF174Q15697 407 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 RILPL1Q5EBL4 403 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 TCEAL5Q5H9L2 206 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 SPOUT1Q5T280 376 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 TWF2Q6IBS0 349 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 CATSPER3Q86XQ3 398 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 KCTD17Q8N5Z5 321 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 CNNM3Q8NE01 707 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 TMEM143Q96AN5 459 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 ZNF668Q96K58 619 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 CWH43Q9H720 699 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 XPNPEP1Q9NQW7 623 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 RNF19AQ9NV58 838 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 TYW1Q9NV66 732 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 PIN4Q9Y237 131 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 FAM50BQ9Y247 325 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 KIAA1671Q9BY89 1806 aa14.01□□□□□ -0.17
CDK5RAP3-222ENST00000581708 TNFRSF10AO00220 468 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms