RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CARNS1A5YM72 827 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 SMCO2A6NFE2 343 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 FAM86B1E9PN63 330 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 IPO5O00410 1097 aaKnown RBP14.43□□□□□ -0.1
SS18-219ENST00000581570 SGSM2O43147 1006 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 PSAPP07602 524 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 FAM86B2P0C5J1 330 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 DARSP14868 501 aaKnown RBP14.43□□□□□ -0.1
SS18-219ENST00000581570 AP3B2Q13367 1082 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 ZNF746Q6NUN9 644 aaPredicted RBP14.43□□□□□ -0.1
SS18-219ENST00000581570 PPP1R18Q6NYC8 613 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 SCLT1Q96NL6 688 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 ZNF577Q9BSK1 485 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 TBC1D22BQ9NU19 505 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 IGSF9Q9P2J2 1179 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 GABBR1Q9UBS5 961 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 WNT16Q9UBV4 365 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 PCDHA10Q9Y5I2 948 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 R4GN57 208 aa14.43□□□□□ -0.1
SS18-219ENST00000581570 NARSO43776 548 aaKnown RBP14.42□□□□□ -0.1
SS18-219ENST00000581570 GALTP07902 379 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 CFHP08603 1231 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 RFX1P22670 979 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 KLRC2P26717 231 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 GPC3P51654 580 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 PUM1Q14671 1186 aaKnown RBP eCLIP14.42□□□□□ -0.1
SS18-219ENST00000581570 LETM2Q2VYF4 491 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 SMAP1Q8IYB5 467 aaPredicted RBP14.42□□□□□ -0.1
SS18-219ENST00000581570 RIN2Q8WYP3 895 aaPredicted RBP14.42□□□□□ -0.1
SS18-219ENST00000581570 RSPH1Q8WYR4 309 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 FAM167AQ96KS9 214 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 HINFPQ9BQA5 517 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 GLT8D2Q9H1C3 349 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 NRDE2Q9H7Z3 1164 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 TCEAL9Q9UHQ7 104 aa14.42□□□□□ -0.1
SS18-219ENST00000581570 IGLV3-22A0A075B6J6 115 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 KRBA1A5PL33 1030 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 CSDE1O75534 798 aaKnown RBP14.41□□□□□ -0.1
SS18-219ENST00000581570 PHKA2P46019 1235 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 CLK2P49760 499 aaKnown RBP14.41□□□□□ -0.1
SS18-219ENST00000581570 PTPN14Q15678 1187 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 SYNE3Q6ZMZ3 975 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 BCL7CQ8WUZ0 217 aaPredicted RBP14.41□□□□□ -0.1
SS18-219ENST00000581570 NLRP7Q8WX94 980 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 KLHL5Q96PQ7 755 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 EMILIN2Q9BXX0 1053 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 LRRC2Q9BYS8 371 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 CHST12Q9NRB3 414 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 NRBP2Q9NSY0 501 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 SAMM50Q9Y512 469 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 CNTNAP5Q8WYK1 1306 aa14.41□□□□□ -0.1
SS18-219ENST00000581570 CYP3A4P08684 503 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 CLCN4P51793 760 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 RNASELQ05823 741 aaKnown RBP14.4□□□□□ -0.1
SS18-219ENST00000581570 TBC1D8BQ0IIM8 1120 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 COL9A3Q14050 684 aaPredicted RBP14.4□□□□□ -0.1
SS18-219ENST00000581570 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
SS18-219ENST00000581570 LONRF3Q496Y0 759 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 NOMO2Q5JPE7 1267 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 JAKMIP3Q5VZ66 844 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 GLB1LQ6UWU2 654 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 C15orf39Q6ZRI6 1047 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 RSAD2Q8WXG1 361 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 LPPQ93052 612 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 GBP3Q9H0R5 595 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 RBM28Q9NW13 759 aaKnown RBP14.4□□□□□ -0.1
SS18-219ENST00000581570 CA14Q9ULX7 337 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 INPP5FQ9Y2H2 1132 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 V9GY48 417 aaPredicted RBP14.4□□□□□ -0.1
SS18-219ENST00000581570 EVPLQ92817 2033 aa14.4□□□□□ -0.1
SS18-219ENST00000581570 hCG_1984214I3L0E3 225 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 OATP04181 439 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 SSBP05455 408 aaKnown RBP eCLIP14.39□□□□□ -0.11
SS18-219ENST00000581570 CNPP09543 421 aaKnown RBP14.39□□□□□ -0.11
SS18-219ENST00000581570 SKIP12755 728 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
SS18-219ENST00000581570 SLC11A1P49279 550 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 SETQ01105 290 aaPredicted RBP14.39□□□□□ -0.11
SS18-219ENST00000581570 TWF2Q6IBS0 349 aaKnown RBP14.39□□□□□ -0.11
SS18-219ENST00000581570 ZC3H14Q6PJT7 736 aaKnown RBP14.39□□□□□ -0.11
SS18-219ENST00000581570 SGMS1Q86VZ5 419 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 ZNF713Q8N859 430 aaPredicted RBP14.39□□□□□ -0.11
SS18-219ENST00000581570 RUBCNQ92622 972 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 VN1R3Q9BXE9 311 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 GCOM2Q9BZD3 368 aaPredicted RBP14.39□□□□□ -0.11
SS18-219ENST00000581570 TBC1D17Q9HA65 648 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 BARHL2Q9NY43 387 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 DNAJB4Q9UDY4 337 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 STK39Q9UEW8 545 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 GVINP1Q7Z2Y8 2422 aa14.39□□□□□ -0.11
SS18-219ENST00000581570 ZNF862O60290 1169 aa14.38□□□□□ -0.11
SS18-219ENST00000581570 N4BP1O75113 896 aaKnown RBP14.38□□□□□ -0.11
SS18-219ENST00000581570 OFD1O75665 1012 aa14.38□□□□□ -0.11
SS18-219ENST00000581570 DCNP07585 359 aaKnown RBP14.38□□□□□ -0.11
SS18-219ENST00000581570 SP9P0CG40 484 aa14.38□□□□□ -0.11
SS18-219ENST00000581570 CDC42EP1Q00587 391 aa14.38□□□□□ -0.11
SS18-219ENST00000581570 SPECC1Q5M775 1068 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms