RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 NAA15Q9BXJ9 866 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-217ENST00000580287 KCTD10Q9H3F6 313 aa13.93□□□□□ -0.18
CDK5RAP3-217ENST00000580287 XPNPEP1Q9NQW7 623 aa13.93□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ANKEF1Q9NU02 776 aa13.93□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ABHD10Q9NUJ1 306 aa13.93□□□□□ -0.18
CDK5RAP3-217ENST00000580287 USP20Q9Y2K6 914 aa13.93□□□□□ -0.18
CDK5RAP3-217ENST00000580287 LGALS16A8MUM7 142 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TISP43B9A030 160 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 OATP04181 439 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TUBB4AP04350 444 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ZNF131P52739 623 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 DRP2Q13474 957 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 XKR3Q5GH77 459 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ZNF720Q7Z2F6 126 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 RNPEPQ9H4A4 650 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 DIS3Q9Y2L1 958 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 PLXNB2O15031 1838 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 PHLPP2Q6ZVD8 1323 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 SLC16A4O15374 487 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ZNF286BP0CG31 522 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 CASQ1P31415 396 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 EPM2AIP1Q7L775 607 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 UBXN4Q92575 508 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 AZI2Q9H6S1 392 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
CDK5RAP3-217ENST00000580287 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TRIM21P19474 475 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TBC1D8BQ0IIM8 1120 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TRIM14Q14142 442 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ZCWPW2Q504Y3 356 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 COBLL1Q53SF7 1204 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TEX35Q5T0J7 233 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 KCNV1Q6PIU1 500 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 NOC3LQ8WTT2 800 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 USP6NLQ92738 828 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ZNF668Q96K58 619 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 NOC4LQ9BVI4 516 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ABHD16BQ9H3Z7 469 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TMEM51Q9NW97 253 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ODF2LQ9ULJ1 636 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 ADGRG1Q9Y653 693 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TTC26A0AVF1 554 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 VEGFBP49765 207 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 KNOP1Q1ED39 458 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TSR1Q2NL82 804 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 CCDC51Q96ER9 411 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 OLFML3Q9NRN5 406 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 KCND2Q9NZV8 630 aa13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-217ENST00000580287 K7ENM7 598 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TGFB1I1O43294 461 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TADA3O75528 432 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 OLFML2BQ68BL8 750 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 LRRC55Q6ZSA7 311 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 LRRC37A2A6NM11 1700 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 GJB1P08034 283 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 PLS3P13797 630 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 H2AFXP16104 143 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 GAP43P17677 238 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 PPP1R2P41236 205 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 KLK7P49862 253 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 DNM2P50570 870 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 POLGP54098 1239 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 IGBP1P78318 339 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 LACTBP83111 547 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TRIM32Q13049 653 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 TMTC1Q8IUR5 882 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 SUGCTQ9HAC7 445 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 PDLIM7Q9NR12 457 aa13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 LARSQ9P2J5 1176 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-217ENST00000580287 CCDC66A2RUB6 948 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GH1P01241 217 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NPTX2P47972 431 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FLT3LGP49771 235 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TNFAIP2Q03169 654 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PRKCZQ05513 592 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 LRRC71Q8N4P6 559 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CCDC155Q8N6L0 562 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CEP89Q96ST8 783 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TRIM10Q9UDY6 481 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ZNF865P0CJ78 1059 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CASP4P49662 377 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ADAM9Q13443 819 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 LAMC2Q13753 1193 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DUSP28Q4G0W2 176 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FAM160B1Q5W0V3 765 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CHP1Q99653 195 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TRPC6Q9Y210 931 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms