RNA–Protein interactions for RNA: ENST00000576360.1

CHRNB1-208, Transcript of cholinergic receptor nicotinic beta 1 subunit, human

TSL 3 BASIC

Gene CHRNB1, Length 1,837 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB1-208	ENST00000576360	DQX1	Q8TE96	717 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SREK1	Q8WXA9	508 aa	Known RBP	11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	DNAJC9	Q8WXX5	260 aa		11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	TUBGCP5	Q96RT8	1024 aa		11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	GDF3	Q9NR23	364 aa		11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	RHBDL2	Q9NX52	303 aa		11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SPO11	Q9Y5K1	396 aa		11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MYH2	Q9UKX2	1941 aa		11.64	□□□□□ -0.55
CHRNB1-208	ENST00000576360	GNRH1	P01148	92 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ITGA2B	P08514	1039 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	RARA	P10276	462 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	VARS	P26640	1264 aa	Known RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MTTP	P55157	894 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PRMT2	P55345	433 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MECOM	Q03112	1051 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	RBL2	Q08999	1139 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	TOB2	Q14106	344 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PARP6	Q2NL67	630 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SLC9C1	Q4G0N8	1177 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SMUG1	Q53HV7	270 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	STRIP1	Q5VSL9	837 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	FBXL16	Q8N461	479 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	RNF10	Q8N5U6	811 aa	Known RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MAGEB6	Q8N7X4	407 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SYT2	Q8N9I0	419 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	RETREG2	Q8NC44	543 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	CAGE1	Q8TC20	777 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ASAP3	Q8TDY4	903 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	STK32A	Q8WU08	396 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	AGBL1	Q96MI9	1066 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	CCDC43	Q96MW1	224 aa	Known RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	CCDC134	Q9H6E4	229 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	NDUFA13	Q9P0J0	144 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	HSFX1	Q9UBD0	423 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	TBC1D30	Q9Y2I9	924 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ASTN2	O75129	1339 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360		A0A0J9YVX5	310 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	CETN3	O15182	167 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SKI	P12755	728 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	HSPA9	P38646	679 aa	Known RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PMS2	P54278	862 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	CDK17	Q00537	523 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	OCRL	Q01968	901 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	BNIP1	Q12981	228 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ERMARD	Q5T6L9	678 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MOB2	Q70IA6	237 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	DZIP1	Q86YF9	867 aa	Known RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MIGA1	Q8NAN2	632 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PPP1R14C	Q8TAE6	165 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	USP33	Q8TEY7	942 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	GATA6	Q92908	595 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	NSUN4	Q96CB9	384 aa	Known RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ITPKC	Q96DU7	683 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	OLFM3	Q96PB7	478 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	OSBPL10	Q9BXB5	764 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	IRF2BPL	Q9H1B7	796 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	INIP	Q9NRY2	104 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	LRP2BP	Q9P2M1	347 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360	FADS3	Q9Y5Q0	445 aa		11.63	□□□□□ -0.55
CHRNB1-208	ENST00000576360		A0A0U1RQJ8	604 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	TCRBV5S4A2T	A0A5A2	114 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	TESPA1	A2RU30	521 aa	Predicted RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360		E7EWF7	191 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	GPAA1	O43292	621 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	AKR1B10	O60218	316 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SUPT3H	O75486	399 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ATP1A1	P05023	1023 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PDE6A	P16499	860 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ERCC5	P28715	1186 aa	Predicted RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	COPS2	P61201	443 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	DYNLL1	P63167	89 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	HPCA	P84074	193 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	EXOSC10	Q01780	885 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PDE4B	Q07343	736 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ALX1	Q15699	326 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PDCD4	Q53EL6	469 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	RASIP1	Q5U651	963 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	FAAH2	Q6GMR7	532 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	CD99L2	Q8TCZ2	262 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	DIS3L	Q8TF46	1054 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ATP6V0A1	Q93050	837 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	SLC10A4	Q96EP9	437 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PBK	Q96KB5	322 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	CENPK	Q9BS16	269 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	AGXT2	Q9BYV1	514 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	PUS7L	Q9H0K6	701 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ARHGEF10L	Q9HCE6	1279 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	RNF14	Q9UBS8	474 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	DMGDH	Q9UI17	866 aa	Known RBP	11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	STXBP5L	Q9Y2K9	1186 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	TAF6L	Q9Y6J9	622 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MYO3B	Q8WXR4	1341 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	ZNF532	Q9HCE3	1301 aa		11.62	□□□□□ -0.55
CHRNB1-208	ENST00000576360	MAST2	Q6P0Q8	1798 aa		11.61	□□□□□ -0.55
CHRNB1-208	ENST00000576360	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.61	□□□□□ -0.55
CHRNB1-208	ENST00000576360	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
CHRNB1-208	ENST00000576360	LSM1	O15116	133 aa	Known RBP	11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms