RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 GABBR1Q9UBS5 961 aa13.81□□□□□ -0.2
PRPF8-208ENST00000573716 CA14Q9ULX7 337 aa13.81□□□□□ -0.2
PRPF8-208ENST00000573716 CEP131Q9UPN4 1083 aa13.81□□□□□ -0.2
PRPF8-208ENST00000573716 SAMM50Q9Y512 469 aa13.81□□□□□ -0.2
PRPF8-208ENST00000573716 RBM8AQ9Y5S9 174 aaKnown RBP13.81□□□□□ -0.2
PRPF8-208ENST00000573716 CACNA1BQ00975 2339 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 A0A0U1RQF3 1178 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 SMCO2A6NFE2 343 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 PSAPP07602 524 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 CTSAP10619 480 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 KLRC2P26717 231 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 GBP2P32456 591 aaPredicted RBP13.8□□□□□ -0.2
PRPF8-208ENST00000573716 SREBF1P36956 1147 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 GIT2Q14161 759 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 TTC22Q5TAA0 569 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 JAKMIP3Q5VZ66 844 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 TYW1BQ6NUM6 668 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 GPR149Q86SP6 731 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 DDX53Q86TM3 631 aaKnown RBP13.8□□□□□ -0.2
PRPF8-208ENST00000573716 PPFIBP1Q86W92 1011 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 RSAD2Q8WXG1 361 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 LPPQ93052 612 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 TMEM87BQ96K49 555 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 ZNF577Q9BSK1 485 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 WDR81Q562E7 1941 aa13.8□□□□□ -0.2
PRPF8-208ENST00000573716 DMXL1Q9Y485 3027 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 NCOR2Q9Y618 2525 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 FAM86B1E9PN63 330 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 DHX15O43143 795 aaKnown RBP13.79□□□□□ -0.2
PRPF8-208ENST00000573716 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 MYBP10242 640 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 DARSP14868 501 aaKnown RBP13.79□□□□□ -0.2
PRPF8-208ENST00000573716 GPC3P51654 580 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 POLGP54098 1239 aaPredicted RBP13.79□□□□□ -0.2
PRPF8-208ENST00000573716 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
PRPF8-208ENST00000573716 GLB1LQ6UWU2 654 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 NIPA1Q7RTP0 329 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 ZNF598Q86UK7 904 aaKnown RBP13.79□□□□□ -0.2
PRPF8-208ENST00000573716 BCL7CQ8WUZ0 217 aaPredicted RBP13.79□□□□□ -0.2
PRPF8-208ENST00000573716 IGSF21Q96ID5 467 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 EMILIN2Q9BXX0 1053 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 SEMA4AQ9H3S1 761 aa13.79□□□□□ -0.2
PRPF8-208ENST00000573716 MAFBQ9Y5Q3 323 aaPredicted RBP13.79□□□□□ -0.2
PRPF8-208ENST00000573716 KRBA1A5PL33 1030 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 SGSM2O43147 1006 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 AP3B2Q13367 1082 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
PRPF8-208ENST00000573716 PUM1Q14671 1186 aaKnown RBP eCLIP13.78□□□□□ -0.2
PRPF8-208ENST00000573716 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 ZNF746Q6NUN9 644 aaPredicted RBP13.78□□□□□ -0.2
PRPF8-208ENST00000573716 PPP1R18Q6NYC8 613 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 FAM167AQ96KS9 214 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 TBC1D17Q9HA65 648 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 TBC1D22BQ9NU19 505 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 IGSF9Q9P2J2 1179 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 DNAJB4Q9UDY4 337 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 PCDHA10Q9Y5I2 948 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 IRAK3Q9Y616 596 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 V9GY48 417 aaPredicted RBP13.78□□□□□ -0.2
PRPF8-208ENST00000573716 CNTNAP5Q8WYK1 1306 aa13.78□□□□□ -0.2
PRPF8-208ENST00000573716 C2CD2LO14523 706 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 KRT37O76014 449 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 DCNP07585 359 aaKnown RBP13.77□□□□□ -0.21
PRPF8-208ENST00000573716 GALTP07902 379 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 LIFRP42702 1097 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 PHKA2P46019 1235 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 SLC11A1P49279 550 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 AAMPQ13685 434 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 NONOQ15233 471 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRPF8-208ENST00000573716 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 ZC3H14Q6PJT7 736 aaKnown RBP13.77□□□□□ -0.21
PRPF8-208ENST00000573716 SMAP1Q8IYB5 467 aaPredicted RBP13.77□□□□□ -0.21
PRPF8-208ENST00000573716 DCLK2Q8N568 766 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 LINC01465Q8N7H1 131 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 KLHL5Q96PQ7 755 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 CEP250Q9BV73 2442 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 NRBP2Q9NSY0 501 aa13.77□□□□□ -0.21
PRPF8-208ENST00000573716 PIN4Q9Y237 131 aaKnown RBP13.77□□□□□ -0.21
PRPF8-208ENST00000573716 IGLV3-22A0A075B6J6 115 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 MEIS3P2A8K0S8 358 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 OATP04181 439 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 CNPP09543 421 aaKnown RBP13.76□□□□□ -0.21
PRPF8-208ENST00000573716 CLCN4P51793 760 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 PRKCEQ02156 737 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 PRR16Q569H4 304 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 RUBCNQ92622 972 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 CNTNAP3BQ96NU0 1288 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 VN1R3Q9BXE9 311 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 CNTNAP3Q9BZ76 1288 aa13.76□□□□□ -0.21
PRPF8-208ENST00000573716 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
PRPF8-208ENST00000573716 MAN1C1Q9NR34 630 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms