RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 KCNQ4P56696 695 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 PPATQ06203 517 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 RBBP5Q15291 538 aaKnown RBP16.64■□□□□ 0.25
SMG6-207ENST00000570756 EPHA7Q15375 998 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
SMG6-207ENST00000570756 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 KIF2BQ8N4N8 673 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 ERVK-5Q9HDB9 667 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 ADAM22Q9P0K1 906 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 GGT7Q9UJ14 662 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 SLC26A4O43511 780 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
SMG6-207ENST00000570756 EVI5O60447 810 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 HIBADHP31937 336 aaKnown RBP16.64■□□□□ 0.25
SMG6-207ENST00000570756 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
SMG6-207ENST00000570756 TAF11Q15544 211 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 NUGGCQ68CJ6 796 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 GCNT4Q9P109 453 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 ZFATQ9P243 1243 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 DDX25Q9UHL0 483 aaKnown RBP16.64■□□□□ 0.25
SMG6-207ENST00000570756 KLHL33A6NCF5 533 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 HIP1RO75146 1068 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 COPB2P35606 906 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 LMNB2Q03252 620 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
SMG6-207ENST00000570756 PCYOX1Q9UHG3 505 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 PCDHA12Q9UN75 941 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 KIAA1024Q9UPX6 916 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
SMG6-207ENST00000570756 GTPBP10A4D1E9 387 aaKnown RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 A6NHS1 94 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 COL4A1P02462 1669 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 CCNB1P14635 433 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 RASA1P20936 1047 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 FGFR4P22455 802 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 RPL21P46778 160 aaKnown RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 TNNI2P48788 182 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 EXOC3L1Q86VI1 746 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 SLC30A5Q8TAD4 765 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 NAF1Q96HR8 494 aaKnown RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 ZHX3Q9H4I2 956 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 SIX2Q9NPC8 291 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 A8MUI8 341 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 E9PMD0 336 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 RPL13P26373 211 aaKnown RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 CDC25CP30307 473 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 PTGIRP43119 386 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 DIXDC1Q155Q3 683 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 APLFQ8IW19 511 aaPredicted RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 LNX1Q8TBB1 728 aaPredicted RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 FBF1Q8TES7 1133 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 C18orf8Q96DM3 657 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 OSBPL1AQ9BXW6 950 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 KLHL14Q9P2G3 628 aa16.62■□□□□ 0.25
SMG6-207ENST00000570756 DBR1Q9UK59 544 aaKnown RBP16.62■□□□□ 0.25
SMG6-207ENST00000570756 TMEM120BA0PK00 339 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 EME2A4GXA9 379 aaPredicted RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 ENO4A6NNW6 628 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 MIF4GDA9UHW6 222 aaKnown RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 E7ENQ6 273 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 SLC16A3O15427 465 aaKnown RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 GGPS1O95749 300 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 NEFHP12036 1026 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 CYP11B2P19099 503 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 VCAM1P19320 739 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 RWDD2BP57060 319 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 ZNF211Q13398 564 aaPredicted RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 LRRC14Q15048 493 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 CCDC38Q502W7 563 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 TRMT10CQ7L0Y3 403 aaKnown RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 UBL4BQ8N7F7 174 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 SLC44A5Q8NCS7 719 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 MGARPQ8TDB4 240 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 YIPF3Q9GZM5 350 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 TXLNGQ9NUQ3 528 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 CCDC87Q9NVE4 849 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 SRCAPQ6ZRS2 3230 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 PDXKO00764 312 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 ABLIM1O14639 778 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 EDIL3O43854 480 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 AHCYL1O43865 530 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 FESP07332 822 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 ABCB4P21439 1286 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 PDE6BP35913 854 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 CCDC15Q0P6D6 951 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 GLYCTKQ8IVS8 523 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 FITM2Q8N6M3 262 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 HAS1Q92839 578 aa16.61■□□□□ 0.25
SMG6-207ENST00000570756 ARHGEF2Q92974 986 aaKnown RBP16.61■□□□□ 0.25
SMG6-207ENST00000570756 SERPINB12Q96P63 405 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms