RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PRAMEF22A3QJZ6 481 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 F8W031 263 aaPredicted RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 GOLGA6L22H0YM25 854 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 APOL3O95236 402 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 ZBTB7AO95365 584 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 LPLP06858 475 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 ASGR2P07307 311 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 DBHP09172 617 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 OSMP13725 252 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 VCAM1P19320 739 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 AGXTP21549 392 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 C5AR1P21730 350 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 SDHBP21912 280 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 MTNR1BP49286 362 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 HDAC1Q13547 482 aaPredicted RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 SLC9A5Q14940 896 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 RRP12Q5JTH9 1297 aaKnown RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 IFIT1BQ5T764 474 aaKnown RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 PRAMEF18Q5VWM3 479 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 TIGD7Q6NT04 549 aaPredicted RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 ESPNLQ6ZVH7 1005 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 KCNK18Q7Z418 384 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 C7orf31Q8N865 590 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 FEZF2Q8TBJ5 459 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 MORC4Q8TE76 937 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 PEX11GQ96HA9 241 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 AIFM3Q96NN9 605 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 TUBGCP5Q96RT8 1024 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 MYL10Q9BUA6 226 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 SLC12A5Q9H2X9 1139 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 PRDM12Q9H4Q4 367 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 PRDM11Q9NQV5 511 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 ZNF277Q9NRM2 450 aaPredicted RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 USP36Q9P275 1121 aaKnown RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 SAP30BPQ9UHR5 308 aaKnown RBP4.74□□□□□ -1.65
UBR1-211ENST00000569971 PPP2R3BQ9Y5P8 575 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 GPR45Q9Y5Y3 372 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 ARAP1Q96P48 1450 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 DNMBPQ6XZF7 1577 aa4.74□□□□□ -1.65
UBR1-211ENST00000569971 SRGAP3O43295 1099 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 PRPF6O94906 941 aaKnown RBP4.73□□□□□ -1.65
UBR1-211ENST00000569971 FAHP16930 419 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 HSPA6P17066 643 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 IGFBP6P24592 240 aaPredicted RBP4.73□□□□□ -1.65
UBR1-211ENST00000569971 HERVK_113P62684 666 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.73□□□□□ -1.65
UBR1-211ENST00000569971 PITRM1Q5JRX3 1037 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 TTC38Q5R3I4 469 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 ZBTB41Q5SVQ8 909 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 GORABQ5T7V8 394 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 RTN4RL1Q86UN2 441 aaPredicted RBP4.73□□□□□ -1.65
UBR1-211ENST00000569971 GGNQ86UU5 652 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 PHYKPLQ8IUZ5 450 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 EXOC8Q8IYI6 725 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 PPM1NQ8N819 430 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 HIPK4Q8NE63 616 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 PWWP2AQ96N64 755 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 MPHOSPH6Q99547 160 aaKnown RBP4.73□□□□□ -1.65
UBR1-211ENST00000569971 MYRFQ9Y2G1 1151 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 HCFC2Q9Y5Z7 792 aa4.73□□□□□ -1.65
UBR1-211ENST00000569971 FRMPD2Q68DX3 1309 aaPredicted RBP4.72□□□□□ -1.65
UBR1-211ENST00000569971 UBA6A0AVT1 1052 aaPredicted RBP4.72□□□□□ -1.65
UBR1-211ENST00000569971 NDUFS2O75306 463 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 MYBP10242 640 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 TRIM27P14373 513 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 AKAP5P24588 427 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 PRR5P85299 388 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 SLC6A3Q01959 620 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 DBPQ10586 325 aaPredicted RBP4.72□□□□□ -1.65
UBR1-211ENST00000569971 GBX1Q14549 363 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 ZNF267Q14586 743 aaPredicted RBP4.72□□□□□ -1.65
UBR1-211ENST00000569971 ZXDCQ2QGD7 858 aaPredicted RBP4.72□□□□□ -1.65
UBR1-211ENST00000569971 B3GNT9Q6UX72 402 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 UNQ6494/PRO21346Q6UXR6 183 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 RPTNQ6XPR3 784 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 CATIPQ7Z7H3 387 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 LYSMD2Q8IV50 215 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 MIER2Q8N344 545 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 TTLL11Q8NHH1 800 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 RUNDC1Q96C34 613 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 DDX11Q96FC9 970 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 MAML3Q96JK9 1138 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 SARGQ9BW04 601 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 BCAS3Q9H6U6 928 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 PCDH18Q9HCL0 1135 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 NMRK2Q9NPI5 230 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 UCKL1Q9NWZ5 548 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 BTBD7Q9P203 1132 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 TUBD1Q9UJT1 453 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 TMPRSS11EQ9UL52 423 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 ASB1Q9Y576 335 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 CARMIL1Q5VZK9 1371 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 LAMC3Q9Y6N6 1575 aa4.72□□□□□ -1.65
UBR1-211ENST00000569971 CUL7Q14999 1698 aa4.71□□□□□ -1.66
UBR1-211ENST00000569971 ARHGAP35Q9NRY4 1499 aa4.71□□□□□ -1.66
UBR1-211ENST00000569971 ERC2O15083 957 aa4.71□□□□□ -1.66
UBR1-211ENST00000569971 CTNND1O60716 968 aaKnown RBP4.71□□□□□ -1.66
UBR1-211ENST00000569971 OFD1O75665 1012 aa4.71□□□□□ -1.66
UBR1-211ENST00000569971 POU2F2P09086 479 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms