RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 DBR1Q9UK59 544 aaKnown RBP16.8■□□□□ 0.28
USB1-214ENST00000568848 NR2E1Q9Y466 385 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 PCDHA10Q9Y5I2 948 aa16.8■□□□□ 0.28
USB1-214ENST00000568848 EP300Q09472 2414 aaPredicted RBP16.8■□□□□ 0.28
USB1-214ENST00000568848 DNAH14Q0VDD8 3507 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 MSH4O15457 936 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 NARSO43776 548 aaKnown RBP16.79■□□□□ 0.28
USB1-214ENST00000568848 CYP3A4P08684 503 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 HOXB8P17481 243 aaPredicted RBP16.79■□□□□ 0.28
USB1-214ENST00000568848 PPM1AP35813 382 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 PFKFB3Q16875 520 aaPredicted RBP16.79■□□□□ 0.28
USB1-214ENST00000568848 MTERF2Q49AM1 385 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 ODR4Q5SWX8 454 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 TDRD5Q8NAT2 981 aaKnown RBP16.79■□□□□ 0.28
USB1-214ENST00000568848 SLC22A17Q8WUG5 538 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 TCEAL9Q9UHQ7 104 aa16.79■□□□□ 0.28
USB1-214ENST00000568848 A0A087WZ62 844 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 A0A0U1RQF3 1178 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 HOXA2O43364 376 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 DTNBO60941 627 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 NPR3P17342 541 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 SLC11A1P49279 550 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 ASTLQ6HA08 431 aaPredicted RBP16.78■□□□□ 0.28
USB1-214ENST00000568848 ZNF280BQ86YH2 543 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 RSAD2Q8WXG1 361 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 TMEM169Q96HH4 297 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 FDXACB1Q9BRP7 624 aaPredicted RBP16.78■□□□□ 0.28
USB1-214ENST00000568848 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 DISC1Q9NRI5 854 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 TBC1D13Q9NVG8 400 aa16.78■□□□□ 0.28
USB1-214ENST00000568848 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
USB1-214ENST00000568848 DMXL1Q9Y485 3027 aa16.77■□□□□ 0.28
USB1-214ENST00000568848 PROB1E7EW31 1015 aa16.77■□□□□ 0.28
USB1-214ENST00000568848 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.28
USB1-214ENST00000568848 DHX32Q7L7V1 743 aaKnown RBP16.77■□□□□ 0.28
USB1-214ENST00000568848 UBALD2Q8IYN6 164 aa16.77■□□□□ 0.28
USB1-214ENST00000568848 REXO1Q8N1G1 1221 aaKnown RBP16.77■□□□□ 0.28
USB1-214ENST00000568848 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.28
USB1-214ENST00000568848 TBC1D22BQ9NU19 505 aa16.77■□□□□ 0.28
USB1-214ENST00000568848 VPS54Q9P1Q0 977 aa16.77■□□□□ 0.28
USB1-214ENST00000568848 COL4A3Q01955 1670 aa16.77■□□□□ 0.28
USB1-214ENST00000568848 F8W810 466 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 MAGEB2O15479 319 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 N4BP1O75113 896 aaKnown RBP16.76■□□□□ 0.27
USB1-214ENST00000568848 STBD1O95210 358 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 EOMESO95936 686 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 NBL1P41271 181 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 MTHFRP42898 656 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 PHKA2P46019 1235 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 ALDH7A1P49419 539 aaKnown RBP16.76■□□□□ 0.27
USB1-214ENST00000568848 ITIH3Q06033 890 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 PTPN14Q15678 1187 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 TWF2Q6IBS0 349 aaKnown RBP16.76■□□□□ 0.27
USB1-214ENST00000568848 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
USB1-214ENST00000568848 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 NECTIN4Q96NY8 510 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 ZMYND12Q9H0C1 365 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 CEP131Q9UPN4 1083 aa16.76■□□□□ 0.27
USB1-214ENST00000568848 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
USB1-214ENST00000568848 ZNF292O60281 2723 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 WDR64B1ANS9 1081 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 C2CD2LO14523 706 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 DDHD2O94830 711 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 TDP2O95551 362 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 GALTP07902 379 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 CTSAP10619 480 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
USB1-214ENST00000568848 TBC1D8BQ0IIM8 1120 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 TARBP2Q15633 366 aaKnown RBP16.75■□□□□ 0.27
USB1-214ENST00000568848 ATAT1Q5SQI0 421 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 Q6ZUG5 572 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 TAS1R1Q7RTX1 841 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 ZDHHC14Q8IZN3 488 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 ADSSL1Q8N142 457 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 ZNF579Q8NAF0 562 aaKnown RBP16.75■□□□□ 0.27
USB1-214ENST00000568848 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
USB1-214ENST00000568848 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
USB1-214ENST00000568848 GAS7O60861 476 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 OFD1O75665 1012 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 CNPP09543 421 aaKnown RBP16.74■□□□□ 0.27
USB1-214ENST00000568848 TMOD1P28289 359 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 LRCH2Q5VUJ6 765 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 CABP7Q86V35 215 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 RHPN2Q8IUC4 686 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 SIX5Q8N196 739 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 BRF1Q92994 677 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 FAM167AQ96KS9 214 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 KLHL5Q96PQ7 755 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 NCOA5Q9HCD5 579 aaKnown RBP16.74■□□□□ 0.27
USB1-214ENST00000568848 C6orf50Q9HD87 102 aa16.74■□□□□ 0.27
USB1-214ENST00000568848 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
USB1-214ENST00000568848 hCG_1984214I3L0E3 225 aa16.73■□□□□ 0.27
USB1-214ENST00000568848 POMCP01189 267 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms