RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 SDHBP21912 280 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 TMOD1P28289 359 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 CLCN4P51793 760 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 ATXN1P54253 815 aaKnown RBP18.36■□□□□ 0.53
CLK3-223ENST00000568488 RNASELQ05823 741 aaKnown RBP18.36■□□□□ 0.53
CLK3-223ENST00000568488 C15orf39Q6ZRI6 1047 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 LRRC71Q8N4P6 559 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 SUMF1Q8NBK3 374 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 LPPQ93052 612 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 NRDE2Q9H7Z3 1164 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 LY9Q9HBG7 655 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 DACT1Q9NYF0 836 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 INPP5FQ9Y2H2 1132 aa18.36■□□□□ 0.53
CLK3-223ENST00000568488 POTEMA6NI47 508 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 CCDC69A6NI79 296 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 MAGEB2O15479 319 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 CSDE1O75534 798 aaKnown RBP18.35■□□□□ 0.53
CLK3-223ENST00000568488 CNPP09543 421 aaKnown RBP18.35■□□□□ 0.53
CLK3-223ENST00000568488 PTH1RQ03431 593 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 ST3GAL2Q16842 350 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 VARS2Q5ST30 1063 aaKnown RBP18.35■□□□□ 0.53
CLK3-223ENST00000568488 PHLDB3Q6NSJ2 640 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 POTEGQ6S5H5 508 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 CHD1LQ86WJ1 897 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 RAB11FIP4Q86YS3 637 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 STAMQ92783 540 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 ARHGEF3Q9NR81 526 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 CEP131Q9UPN4 1083 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 OTOGLQ3ZCN5 2332 aa18.35■□□□□ 0.53
CLK3-223ENST00000568488 CCDC195A0A1B0GUA6 201 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 KIAA0319Q5VV43 1072 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 DCLRE1AQ6PJP8 1040 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 CASC1Q6TDU7 716 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 PLA2G4DQ86XP0 818 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 NLRP7Q8WX94 980 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 MYADMQ96S97 322 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 VN1R3Q9BXE9 311 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 ANO3Q9BYT9 981 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 MAN1C1Q9NR34 630 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 TBC1D13Q9NVG8 400 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 DLGAP2Q9P1A6 1054 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 TCEAL9Q9UHQ7 104 aa18.34■□□□□ 0.53
CLK3-223ENST00000568488 ZFHX4Q86UP3 3567 aa18.33■□□□□ 0.53
CLK3-223ENST00000568488 CARNS1A5YM72 827 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 C2CD2LO14523 706 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 FOSP01100 380 aaPredicted RBP18.33■□□□□ 0.52
CLK3-223ENST00000568488 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.52
CLK3-223ENST00000568488 SLC11A1P49279 550 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 GPC3P51654 580 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 NAPAP54920 295 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 NOMO2Q5JPE7 1267 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 GLB1LQ6UWU2 654 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 MB21D2Q8IYB1 491 aaPredicted RBP18.33■□□□□ 0.52
CLK3-223ENST00000568488 ST13P5Q8NFI4 369 aaPredicted RBP18.33■□□□□ 0.52
CLK3-223ENST00000568488 FOXQ1Q9C009 403 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 WDR6Q9NNW5 1121 aaKnown RBP18.33■□□□□ 0.52
CLK3-223ENST00000568488 GABBR1Q9UBS5 961 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 DNAJB4Q9UDY4 337 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 MAFBQ9Y5Q3 323 aaPredicted RBP18.33■□□□□ 0.52
CLK3-223ENST00000568488 ACACBO00763 2458 aa18.33■□□□□ 0.52
CLK3-223ENST00000568488 DCDC2BA2VCK2 349 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
CLK3-223ENST00000568488 LRRN2O75325 713 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 PHKA2P46019 1235 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 ZNF710Q8N1W2 664 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 NXPE3Q969Y0 559 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 RIC8AQ9NPQ8 531 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 MRPL17Q9NRX2 175 aaKnown RBP18.32■□□□□ 0.52
CLK3-223ENST00000568488 EPS15L1Q9UBC2 864 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 CDV3Q9UKY7 258 aaKnown RBP18.32■□□□□ 0.52
CLK3-223ENST00000568488 CACNA1GO43497 2377 aa18.32■□□□□ 0.52
CLK3-223ENST00000568488 C2orf16Q68DN1 1984 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 CLUHO75153 1309 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 IPO5O00410 1097 aaKnown RBP18.31■□□□□ 0.52
CLK3-223ENST00000568488 PRC1O43663 620 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 PSAPP07602 524 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 CALM1P0DP23 149 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 CALM2P0DP24 149 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 CALM3P0DP25 149 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 GLULP15104 373 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 TWF2Q6IBS0 349 aaKnown RBP18.31■□□□□ 0.52
CLK3-223ENST00000568488 MAML2Q8IZL2 1156 aaPredicted RBP18.31■□□□□ 0.52
CLK3-223ENST00000568488 GPR161Q8N6U8 529 aaKnown RBP18.31■□□□□ 0.52
CLK3-223ENST00000568488 PJA1Q8NG27 643 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 ZNF577Q9BSK1 485 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 PIDD1Q9HB75 910 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 SPATA6Q9NWH7 488 aaPredicted RBP18.31■□□□□ 0.52
CLK3-223ENST00000568488 SAMM50Q9Y512 469 aa18.31■□□□□ 0.52
CLK3-223ENST00000568488 SPTBN2O15020 2390 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 MEIS3P2A8K0S8 358 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 FAM86B1E9PN63 330 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 INPPL1O15357 1258 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 LAMTOR5O43504 91 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 RFPL2O75678 378 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 FAM86B2P0C5J1 330 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 AK2P54819 239 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 WWC2Q6AWC2 1192 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 ELMSAN1Q6PJG2 1045 aa18.3■□□□□ 0.52
CLK3-223ENST00000568488 NIPA1Q7RTP0 329 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms