RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 KIF2CQ99661 725 aa20.97■□□□□ 0.95
IFT140-208ENST00000566818 EIF2AK1Q9BQI3 630 aaKnown RBP20.97■□□□□ 0.95
IFT140-208ENST00000566818 DHX33Q9H6R0 707 aaKnown RBP20.97■□□□□ 0.95
IFT140-208ENST00000566818 BRWD1Q9NSI6 2320 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 ATG2AQ2TAZ0 1938 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 TCF20Q9UGU0 1960 aaKnown RBP20.96■□□□□ 0.95
IFT140-208ENST00000566818 CSPG5O95196 566 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 TXKP42681 527 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 UBE3AQ05086 875 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 ORC2Q13416 577 aaPredicted RBP20.96■□□□□ 0.95
IFT140-208ENST00000566818 EMC2Q15006 297 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 CATSPER4Q7RTX7 472 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 TPH2Q8IWU9 490 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 POF1BQ8WVV4 589 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 FOXP1Q9H334 677 aaPredicted RBP20.96■□□□□ 0.95
IFT140-208ENST00000566818 PIN4Q9Y237 131 aaKnown RBP20.96■□□□□ 0.95
IFT140-208ENST00000566818 ARID2Q68CP9 1835 aa20.96■□□□□ 0.95
IFT140-208ENST00000566818 A0A0U1RQF3 1178 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 ST18O60284 1047 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 CSDE1O75534 798 aaKnown RBP20.95■□□□□ 0.94
IFT140-208ENST00000566818 LYPLA2O95372 231 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 EOMESO95936 686 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 SKIP12755 728 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 ATP2B1P20020 1258 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 COL19A1Q14993 1142 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 THNSL1Q8IYQ7 743 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 COLGALT1Q8NBJ5 622 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 SPPL3Q8TCT6 385 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 RSPH1Q8WYR4 309 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 NECAB3Q96P71 396 aaPredicted RBP20.95■□□□□ 0.94
IFT140-208ENST00000566818 MTRQ99707 1265 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 TYW1Q9NV66 732 aaKnown RBP20.95■□□□□ 0.94
IFT140-208ENST00000566818 CLDND1Q9NY35 253 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 FAM50BQ9Y247 325 aa20.95■□□□□ 0.94
IFT140-208ENST00000566818 SLITRK3O94933 977 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 MCM7P33993 719 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 RAB27AP51159 221 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 TWF2Q6IBS0 349 aaKnown RBP20.94■□□□□ 0.94
IFT140-208ENST00000566818 KSR1Q8IVT5 923 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 ZNF579Q8NAF0 562 aaKnown RBP20.94■□□□□ 0.94
IFT140-208ENST00000566818 FBXO18Q8NFZ0 1043 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 TMEM143Q96AN5 459 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 MTMR9Q96QG7 549 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 MRPL9Q9BYD2 267 aaKnown RBP20.94■□□□□ 0.94
IFT140-208ENST00000566818 BMP2KQ9NSY1 1161 aaPredicted RBP20.94■□□□□ 0.94
IFT140-208ENST00000566818 ANKEF1Q9NU02 776 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 KIF3AQ9Y496 699 aa20.94■□□□□ 0.94
IFT140-208ENST00000566818 WNT7AO00755 349 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 ASAP2O43150 1006 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 PPM1AP35813 382 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 LAMTOR4Q0VGL1 99 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 HYAL1Q12794 435 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 PTCRAQ6ISU1 281 aaPredicted RBP20.93■□□□□ 0.94
IFT140-208ENST00000566818 SRGAP1Q7Z6B7 1085 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 PRPF31Q8WWY3 499 aaKnown RBP20.93■□□□□ 0.94
IFT140-208ENST00000566818 CASD1Q96PB1 797 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 HSD17B14Q9BPX1 270 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 TRAIPQ9BWF2 469 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 CWH43Q9H720 699 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 RNF19AQ9NV58 838 aa20.93■□□□□ 0.94
IFT140-208ENST00000566818 NOL7Q9UMY1 257 aaKnown RBP20.93■□□□□ 0.94
IFT140-208ENST00000566818 NCOR1O75376 2440 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 H3BQ06 376 aaPredicted RBP20.92■□□□□ 0.94
IFT140-208ENST00000566818 FGF18O76093 207 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 DNAJB1P25685 340 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 PHKA2P46019 1235 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 CAMK1Q14012 370 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 ZNF598Q86UK7 904 aaKnown RBP20.92■□□□□ 0.94
IFT140-208ENST00000566818 NOSTRINQ8IVI9 506 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.92■□□□□ 0.94
IFT140-208ENST00000566818 ZNF558Q96NG5 402 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 IFT122Q9HBG6 1241 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 TLR9Q9NR96 1032 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 HCSTQ9UBK5 93 aa20.92■□□□□ 0.94
IFT140-208ENST00000566818 FSD2A1L4K1 749 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 POTEMA6NI47 508 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 DGAT1O75907 488 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 OR52Z1P0C646 297 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 SRGAP2CP0DJJ0 459 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 TRAPPC10P48553 1259 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 TFDP1Q14186 410 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 MXD4Q14582 209 aaPredicted RBP20.91■□□□□ 0.94
IFT140-208ENST00000566818 CLLU1OSQ5K130 101 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 TTC38Q5R3I4 469 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 PDE12Q6L8Q7 609 aaKnown RBP20.91■□□□□ 0.94
IFT140-208ENST00000566818 FERMT3Q86UX7 667 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 ERMNQ8TAM6 284 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 HELQQ8TDG4 1101 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 TMEM60Q9H2L4 133 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 IGFLR1Q9H665 355 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 PLXNA4Q9HCM2 1894 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 AGPAT5Q9NUQ2 364 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 PUF60Q9UHX1 559 aaKnown RBP20.91■□□□□ 0.94
IFT140-208ENST00000566818 LZTS1Q9Y250 596 aa20.91■□□□□ 0.94
IFT140-208ENST00000566818 BDP1A6H8Y1 2624 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 CARNS1A5YM72 827 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 ATF7P17544 494 aaPredicted RBP20.9■□□□□ 0.94
IFT140-208ENST00000566818 IRS1P35568 1242 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 CTC1Q2NKJ3 1217 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 RNF149Q8NC42 400 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms