RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 GCFC2P16383 781 aaKnown RBP16.84■□□□□ 0.29
RNF40-209ENST00000566703 HOXB8P17481 243 aaPredicted RBP16.84■□□□□ 0.29
RNF40-209ENST00000566703 XBP1P17861 261 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 PPP2R5CQ13362 524 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 DRP2Q13474 957 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 BMP8AQ7Z5Y6 402 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 MFSD14AQ96MC6 490 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 NAP1L4Q99733 375 aaKnown RBP16.84■□□□□ 0.29
RNF40-209ENST00000566703 TCF25Q9BQ70 676 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 MRPL9Q9BYD2 267 aaKnown RBP16.84■□□□□ 0.29
RNF40-209ENST00000566703 SUCLA2Q9P2R7 463 aaPredicted RBP16.84■□□□□ 0.29
RNF40-209ENST00000566703 MUTYHQ9UIF7 546 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 PPME1Q9Y570 386 aa16.84■□□□□ 0.29
RNF40-209ENST00000566703 CCDC194A0A1B0GVG4 234 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 SFPQP23246 707 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNF40-209ENST00000566703 QARSP47897 775 aaKnown RBP16.83■□□□□ 0.28
RNF40-209ENST00000566703 STK3Q13188 491 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 BMS1Q14692 1282 aaKnown RBP16.83■□□□□ 0.28
RNF40-209ENST00000566703 INF2Q27J81 1249 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 CLLU1OSQ5K130 101 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 VN1R2Q8NFZ6 395 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 ZNF668Q96K58 619 aaPredicted RBP16.83■□□□□ 0.28
RNF40-209ENST00000566703 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.28
RNF40-209ENST00000566703 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 KIAA1671Q9BY89 1806 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 S1PR5Q9H228 398 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 ENTPD7Q9NQZ7 604 aa16.83■□□□□ 0.28
RNF40-209ENST00000566703 STK36Q9NRP7 1315 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 A0A087WZ62 844 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 TBX3O15119 743 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 ZNF623O75123 536 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 P4HBP07237 508 aaKnown RBP16.82■□□□□ 0.28
RNF40-209ENST00000566703 FGFR4P22455 802 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 ALDH7A1P49419 539 aaKnown RBP16.82■□□□□ 0.28
RNF40-209ENST00000566703 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 PLPP4Q5VZY2 271 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 ANKRD54Q6NXT1 300 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 ANO5Q75V66 913 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 TMC7Q7Z402 723 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 SLC39A11Q8N1S5 342 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 MRPL43Q8N983 215 aaKnown RBP16.82■□□□□ 0.28
RNF40-209ENST00000566703 RNF169Q8NCN4 708 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 AIFM3Q96NN9 605 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 FDXACB1Q9BRP7 624 aaPredicted RBP16.82■□□□□ 0.28
RNF40-209ENST00000566703 SLKQ9H2G2 1235 aaPredicted RBP16.82■□□□□ 0.28
RNF40-209ENST00000566703 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
RNF40-209ENST00000566703 PHKA2P46019 1235 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 SCRN1Q12765 414 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 SMC1AQ14683 1233 aaKnown RBP16.81■□□□□ 0.28
RNF40-209ENST00000566703 RHPN2Q8IUC4 686 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 HELQQ8TDG4 1101 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 CASP10Q92851 521 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 CYP26B1Q9NR63 512 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 VAV3Q9UKW4 847 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 KCNJ14Q9UNX9 436 aa16.81■□□□□ 0.28
RNF40-209ENST00000566703 PLXNA4Q9HCM2 1894 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 TMEM150BA6NC51 233 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 HIDE1A8MVS5 230 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 EML1O00423 815 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 SLC37A4O43826 429 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 PFKFB2O60825 505 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 CSDE1O75534 798 aaKnown RBP16.8■□□□□ 0.28
RNF40-209ENST00000566703 TECP42680 631 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 RAB27AP51159 221 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 BCAR1P56945 870 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 ANAPC15P60006 121 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
RNF40-209ENST00000566703 ANKRD1Q15327 319 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 EPHA7Q15375 998 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
RNF40-209ENST00000566703 SYCE2Q6PIF2 218 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 HFE2Q6ZVN8 426 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 C4orf19Q8IY42 314 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 WASF1Q92558 559 aa16.8■□□□□ 0.28
RNF40-209ENST00000566703 ASAP2O43150 1006 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 GAS2O43903 313 aaKnown RBP16.79■□□□□ 0.28
RNF40-209ENST00000566703 RFC5P40937 340 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 POLGP54098 1239 aaPredicted RBP16.79■□□□□ 0.28
RNF40-209ENST00000566703 ZXDAP98168 799 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 GIT2Q14161 759 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 GLB1LQ6UWU2 654 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 TRIM67Q6ZTA4 783 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 OTUD6AQ7L8S5 288 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 CATSPER4Q7RTX7 472 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 SRGAP1Q7Z6B7 1085 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 PGBD4Q96DM1 585 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 TMEM169Q96HH4 297 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 RPGRIP1Q96KN7 1286 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 CEP170P1Q96L14 293 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 SH2D3AQ9BRG2 576 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 DHX33Q9H6R0 707 aaKnown RBP16.79■□□□□ 0.28
RNF40-209ENST00000566703 IFT122Q9HBG6 1241 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 FAM105AQ9NUU6 356 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 IRAK3Q9Y616 596 aa16.79■□□□□ 0.28
RNF40-209ENST00000566703 WDR81Q562E7 1941 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 C2orf71A6NGG8 1288 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 MARCH6O60337 910 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms