RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 EP400NLQ6ZTU2 488 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 FRMD7Q6ZUT3 714 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 PDZD4Q76G19 769 aaPredicted RBP3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 C16orf59Q7L2K0 433 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 OSTM1Q86WC4 334 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 C1QL4Q86Z23 238 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 WFDC3Q8IUB2 231 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 CILP2Q8IUL8 1156 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 KIAA0319LQ8IZA0 1049 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 OR8H2Q8N162 312 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM26EQ8N5C1 309 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 MFSD2AQ8NA29 543 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ZNF527Q8NB42 609 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 GIMAP8Q8ND71 665 aaPredicted RBP3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 IL17REQ8NFR9 667 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 EAF2Q96CJ1 260 aaPredicted RBP3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 VWCEQ96DN2 955 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 UBXN10Q96LJ8 280 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ACAP3Q96P50 834 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 CGRRF1Q99675 332 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 BARD1Q99728 777 aaKnown RBP3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 LRFN3Q9BTN0 628 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ASCC2Q9H1I8 757 aaPredicted RBP3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ZMAT4Q9H898 229 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 KIAA1586Q9HCI6 787 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 RIC8AQ9NPQ8 531 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ITM2CQ9NQX7 267 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 BLOC1S4Q9NUP1 217 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM105AQ9NUU6 356 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 LRFN1Q9P244 771 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 GRHPRQ9UBQ7 328 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 STAP2Q9UGK3 403 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 FBXL7Q9UJT9 491 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ADAMTS6Q9UKP5 1117 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 L1RE1Q9UN81 338 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 SRPK3Q9UPE1 567 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 CEP83Q9Y592 693 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 NPFFR2Q9Y5X5 522 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 CUX2O14529 1486 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 DVL2O14641 736 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 GFPT2O94808 682 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 CSTBP04080 98 aaKnown RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 LPLP06858 475 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM87AP0C7U9 286 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 VDRP11473 427 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 GNAT1P11488 350 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 CD40P25942 277 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 CAP2P40123 477 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 MTNR1BP49286 362 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 SLC16A1P53985 500 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 EIF5P55010 431 aaKnown RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 MPP1Q00013 466 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 NMIQ13287 307 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 LAPTM5Q13571 262 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 PMS2P11Q13670 270 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 PRKG1Q13976 671 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 TMEM132BQ14DG7 1078 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 UGT8Q16880 541 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 INF2Q27J81 1249 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 ANO6Q4KMQ2 910 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 PAN2Q504Q3 1202 aaKnown RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 DGKKQ5KSL6 1271 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 E4F1Q66K89 784 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 CIAPIN1Q6FI81 312 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 ESRP1Q6NXG1 681 aaKnown RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 PDXDC1Q6P996 788 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 C16orf54Q6UWD8 224 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 DBX2Q6ZNG2 339 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 RINLQ6ZS11 566 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 OTOP1Q7RTM1 612 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 TBC1D1Q86TI0 1168 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 DPP9Q86TI2 863 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 AMIGO3Q86WK7 504 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 SYTL1Q8IYJ3 562 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 SMYD4Q8IYR2 804 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 KRT78Q8N1N4 520 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 OXR1Q8N573 874 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 ATG16L2Q8NAA4 619 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 FBXO15Q8NCQ5 510 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 ZSCAN31Q96LW9 406 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 NT5C1BQ96P26 610 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 JAM3Q9BX67 310 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 OSBPL5Q9H0X9 879 aaPredicted RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 ARMT1Q9H993 441 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 SMURF1Q9HCE7 757 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 ALG13Q9NP73 1137 aaKnown RBP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 CLDND1Q9NY35 253 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 PGAP2Q9UHJ9 254 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 SNX11Q9Y5W9 270 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 LMTK3Q96Q04 1460 aa3.92□□□□□ -1.78
HERPUD1-211ENST00000566550 NPHP3-ACAD11A0A0J9YXS1 232 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 A0A1B0GVC2 190 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 A0A1W2PRQ8 180 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ZNF503-AS2A6NEH8 195 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 CCDC154A6NI56 674 aa3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM155AB1AL88 458 aaPredicted RBP3.91□□□□□ -1.78
HERPUD1-211ENST00000566550 ZNF561-AS1K7EIQ3 104 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms