RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 GJA8P48165 433 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MAP3K10Q02779 954 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TFCP2Q12800 502 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TNNI3KQ59H18 835 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 MIER3Q7Z3K6 550 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TTC8Q8TAM2 541 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ATG4AQ8WYN0 398 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KRT12Q99456 494 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 BOLA2Q9H3K6 86 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NHEJ1Q9H9Q4 299 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 FPGT-TNNI3KV9GXZ4 949 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CRYBG1Q9Y4K1 1723 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GOLGA8AA7E2F4 631 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DAB1O75553 588 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 S100BP04271 92 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 VDRP11473 427 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 SKIP12755 728 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CETN2P41208 172 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GEMIN4P57678 1058 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 OLR1P78380 273 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DHX9Q08211 1270 aaKnown RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 C3orf67Q6ZVT6 689 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NANOGNBQ7Z5D8 188 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TMEM110Q86TL2 294 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 BAP1Q92560 729 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 ERGIC2Q96RQ1 377 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.13□□□□□ -1.919e-7■■■■□ 21.2
CHD9-218ENST00000566029 SPANXCQ9NY87 97 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 STMND1H3BQB6 276 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KRT36O76013 467 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 PDHA1P08559 390 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 RARGP13631 454 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 FOSL1P15407 271 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KCNA3P22001 575 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DNM2P50570 870 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CCR3P51677 355 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 IFI35P80217 286 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 TUBA3CQ13748 450 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 KLHDC7AQ5VTJ3 777 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TTI2Q6NXR4 508 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 TBC1D10CQ8IV04 446 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 CCDC110Q8TBZ0 833 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 DENND2DQ9H6A0 471 aaPredicted RBP3.13□□□□□ -1.91
CHD9-218ENST00000566029 FAIMQ9NVQ4 179 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 GDAQ9Y2T3 454 aa3.13□□□□□ -1.91
CHD9-218ENST00000566029 NWD1Q149M9 1564 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 DUOX1Q9NRD9 1551 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PIK3C2BO00750 1634 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 A0A0J9YVX5 310 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SPDYE16A6NNV3 312 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 LGR5O75473 907 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ATP5HO75947 161 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 GBP1P32455 592 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CTNNA1P35221 906 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 MLH1P40692 756 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TTLL12Q14166 644 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 ADRM1Q16186 407 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 P3H1Q32P28 736 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ZNF362Q5T0B9 420 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 JADE1Q6IE81 842 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PI16Q6UXB8 463 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 NUDT16Q96DE0 195 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 NOX5Q96PH1 765 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SMC6Q96SB8 1091 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 IL1RAPL1Q9NZN1 696 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CNOT7Q9UIV1 285 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 SPHKAPQ2M3C7 1700 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TUBAL3A6NHL2 446 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 RGL2O15211 777 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 DDHD2O94830 711 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 USP11P51784 963 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ATN1P54259 1190 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 KLRC3Q07444 240 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 MGAT5Q09328 741 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 KRR1Q13601 381 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 SLC44A4Q53GD3 710 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 KLHL7Q8IXQ5 586 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 OXER1Q8TDS5 423 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TUBGCP5Q96RT8 1024 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CORO1BQ9BR76 489 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ASCC2Q9H1I8 757 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 RNPEPQ9H4A4 650 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 IFT122Q9HBG6 1241 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 KCNK9Q9NPC2 374 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 INTS9Q9NV88 658 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 ETNK2Q9NVF9 386 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 STXBP5LQ9Y2K9 1186 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 IGKV5-2P06315 115 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CHN1P15882 459 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SLC12A1Q13621 1099 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ALFQ53S48 1182 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 UNC13DQ70J99 1090 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 C4orf19Q8IY42 314 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 RBBP8NLQ8NC74 664 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 EYA1Q99502 592 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 MIS12Q9H081 205 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 FGFR1OP2Q9NVK5 253 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 FLT4P35916 1363 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TRIM75PA6NK02 468 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms