RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 SSPNQ14714 243 aa6.3□□□□□ -1.4
CDH1-207ENST00000564745 RRP12Q5JTH9 1297 aaKnown RBP6.3□□□□□ -1.4
CDH1-207ENST00000564745 LCE1DQ5T752 114 aa6.3□□□□□ -1.4
CDH1-207ENST00000564745 MCTP1Q6DN14 999 aa6.3□□□□□ -1.4
CDH1-207ENST00000564745 CXorf57Q6NSI4 855 aaKnown RBP6.3□□□□□ -1.4
CDH1-207ENST00000564745 CDYL2Q8N8U2 506 aa6.3□□□□□ -1.4
CDH1-207ENST00000564745 CLIP3Q96DZ5 547 aa6.3□□□□□ -1.4
CDH1-207ENST00000564745 ACE2Q9BYF1 805 aaPredicted RBP6.3□□□□□ -1.4
CDH1-207ENST00000564745 HAPLN2Q9GZV7 340 aa6.3□□□□□ -1.4
CDH1-207ENST00000564745 DNAI1Q9UI46 699 aa6.3□□□□□ -1.4
CDH1-207ENST00000564745 MAP4K4O95819 1239 aaPredicted RBP6.29□□□□□ -1.4
CDH1-207ENST00000564745 MYBP10242 640 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 STAT5BP51692 787 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 SLC5A3P53794 718 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 ADRM1Q16186 407 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 PRR31Q5SQ13 230 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 GRAMD4Q6IC98 578 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 TRMT10BQ6PF06 316 aaKnown RBP6.29□□□□□ -1.4
CDH1-207ENST00000564745 DPP8Q6V1X1 898 aaPredicted RBP6.29□□□□□ -1.4
CDH1-207ENST00000564745 OTOP2Q7RTS6 562 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 BMP8AQ7Z5Y6 402 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 FAM129CQ86XR2 697 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 TTLL6Q8N841 843 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 FNIP1Q8TF40 1166 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 COA7Q96BR5 231 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 DYDC2Q96IM9 177 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 GTPBP4Q9BZE4 634 aaKnown RBP6.29□□□□□ -1.4
CDH1-207ENST00000564745 SLC12A5Q9H2X9 1139 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 PCDH18Q9HCL0 1135 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 DDX20Q9UHI6 824 aaKnown RBP6.29□□□□□ -1.4
CDH1-207ENST00000564745 PMF1-BGLAPU3KQ54 211 aa6.29□□□□□ -1.4
CDH1-207ENST00000564745 CUTAO60888 179 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 HNRNPLP14866 589 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDH1-207ENST00000564745 IL13P35225 146 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 ADKP55263 362 aaKnown RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 DLX2Q07687 328 aaPredicted RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 MGAT5Q09328 741 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 MESP2Q0VG99 397 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 DGKDQ16760 1214 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 UAP1L1Q3KQV9 507 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 IFIT1BQ5T764 474 aaKnown RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 TMEM200BQ69YZ2 307 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 B3GNT9Q6UX72 402 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 SYDE1Q6ZW31 735 aaPredicted RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 CXXC5Q7LFL8 322 aaKnown RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 ADGRG2Q8IZP9 1017 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 THEMISQ8N1K5 641 aaPredicted RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 MIER2Q8N344 545 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 NRG4Q8WWG1 115 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 SSH1Q8WYL5 1049 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 DPF2Q92785 391 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 TIFAQ96CG3 184 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 HIST1H2AHQ96KK5 128 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 SIGLEC10Q96LC7 697 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 NUP88Q99567 741 aaPredicted RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 HIST1H2AJQ99878 128 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 GEMIN8Q9NWZ8 242 aaKnown RBP6.28□□□□□ -1.4
CDH1-207ENST00000564745 OBP2AQ9NY56 170 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 LIMCH1Q9UPQ0 1083 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 IRAK3Q9Y616 596 aa6.28□□□□□ -1.4
CDH1-207ENST00000564745 A0A0G2JNJ9 132 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 CCDC194A0A1B0GVG4 234 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 H0Y858 1186 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 KIF3BO15066 747 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 AP1G1O43747 822 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
CDH1-207ENST00000564745 SEC24DO94855 1032 aaPredicted RBP6.27□□□□□ -1.41
CDH1-207ENST00000564745 KLHL18O94889 574 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 KRT1P04264 644 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 PI3P19957 117 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 EDNRBP24530 442 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 KCNQ1P51787 676 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 CD69Q07108 199 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 PPP3CAQ08209 521 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 MALLQ13021 153 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 GFOD2Q3B7J2 385 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 CCDC146Q8IYE0 955 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 GLB1L3Q8NCI6 653 aaPredicted RBP6.27□□□□□ -1.41
CDH1-207ENST00000564745 ZNF526Q8TF50 670 aaPredicted RBP6.27□□□□□ -1.41
CDH1-207ENST00000564745 RSAD2Q8WXG1 361 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 CCDC136Q96JN2 1154 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 AIFM3Q96NN9 605 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 CSRNP2Q9H175 543 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 POLR3BQ9NW08 1133 aaPredicted RBP6.27□□□□□ -1.41
CDH1-207ENST00000564745 Q9UFV3 132 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 SCOCQ9UIL1 159 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 DNM3Q9UQ16 869 aa6.27□□□□□ -1.41
CDH1-207ENST00000564745 A0A1B0GTL3 188 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 GOLGA6CA6NDK9 693 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 GOLGA6BA6NDN3 693 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDH1-207ENST00000564745 TMEM127O75204 238 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 POU2F2P09086 479 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 GOLGA6DP0CG33 693 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 ZNF28P17035 718 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 GPR15P49685 360 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 GTF2H3Q13889 308 aa6.26□□□□□ -1.41
CDH1-207ENST00000564745 GRM3Q14832 879 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms