RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CPA4Q9UI42 421 aa17.06■□□□□ 0.32
COMMD4-210ENST00000564587 GOLGA6L9A6NEM1 432 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 TMEM88BA6NKF7 163 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 KIF2AO00139 706 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-210ENST00000564587 SLC16A4O15374 487 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 ZSCAN12O43309 604 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 ALDH1A1P00352 501 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 AFPP02771 609 aaKnown RBP17.05■□□□□ 0.32
COMMD4-210ENST00000564587 HOXC6P09630 235 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 KRT9P35527 623 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 TM4SF4P48230 202 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 ZBED6P86452 979 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 KCNA1Q09470 495 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 MAP2K5Q13163 448 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 PTPN21Q16825 1174 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 MORN1Q5T089 497 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 CEP135Q66GS9 1140 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 TRMT1LQ7Z2T5 733 aaKnown RBP17.05■□□□□ 0.32
COMMD4-210ENST00000564587 TMEM139Q8IV31 216 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 MAP4K3Q8IVH8 894 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-210ENST00000564587 FAM186BQ8IYM0 893 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 TMEM161BQ8NDZ6 487 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 CPLX3Q8WVH0 158 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 POLR3FQ9H1D9 316 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-210ENST00000564587 NUCKS1Q9H1E3 243 aaKnown RBP17.05■□□□□ 0.32
COMMD4-210ENST00000564587 GPRC5CQ9NQ84 441 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 ABHD10Q9NUJ1 306 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 ZNHIT6Q9NWK9 470 aaKnown RBP17.05■□□□□ 0.32
COMMD4-210ENST00000564587 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
COMMD4-210ENST00000564587 GTPBP10A4D1E9 387 aaKnown RBP17.04■□□□□ 0.32
COMMD4-210ENST00000564587 FAM155AB1AL88 458 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-210ENST00000564587 CLIC2O15247 247 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 HBP1O60381 514 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 MAFO75444 373 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-210ENST00000564587 AKAP3O75969 853 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 SNAI1O95863 264 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-210ENST00000564587 NAMPTP43490 491 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 FXR1P51114 621 aaKnown RBP eCLIP17.04■□□□□ 0.32
COMMD4-210ENST00000564587 ARHGAP1Q07960 439 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 IER5Q5VY09 327 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 CYP26C1Q6V0L0 522 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 CCAR2Q8N163 923 aaKnown RBP17.04■□□□□ 0.32
COMMD4-210ENST00000564587 NEK11Q8NG66 645 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 PPTC7Q8NI37 304 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 SOCS4Q8WXH5 440 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 DNAJC7Q99615 494 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 SH2D3AQ9BRG2 576 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 TTYH3Q9C0H2 523 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 KATNBL1Q9H079 304 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 ERAP1Q9NZ08 941 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 PCDH10Q9P2E7 1040 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
COMMD4-210ENST00000564587 SIK3Q9Y2K2 1263 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 DAAM1Q9Y4D1 1078 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 TELO2Q9Y4R8 837 aa17.04■□□□□ 0.32
COMMD4-210ENST00000564587 TTC26A0AVF1 554 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 DENND3A2RUS2 1198 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
COMMD4-210ENST00000564587 EXOC3O60645 756 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 OFD1O75665 1012 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 KRT13P13646 458 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 ARL2P36404 184 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 ENPEPQ07075 957 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 KCNH2Q12809 1159 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 ACVR2BQ13705 512 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 DUSP28Q4G0W2 176 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 BRDTQ58F21 947 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-210ENST00000564587 INTS8Q75QN2 995 aaKnown RBP17.03■□□□□ 0.32
COMMD4-210ENST00000564587 CEP89Q96ST8 783 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 PDGFCQ9NRA1 345 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 ARHGAP28Q9P2N2 729 aa17.03■□□□□ 0.32
COMMD4-210ENST00000564587 PPFIA4O75335 1185 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 RGS2P41220 211 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 CDK17Q00537 523 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 ZNF484Q5JVG2 852 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 DNTTIP2Q5QJE6 756 aaKnown RBP17.02■□□□□ 0.32
COMMD4-210ENST00000564587 OLFML2BQ68BL8 750 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 XXYLT1Q8NBI6 393 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 BORCS6Q96GS4 357 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 MMRN2Q9H8L6 949 aa17.02■□□□□ 0.32
COMMD4-210ENST00000564587 CA12O43570 354 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 N4BP1O75113 896 aaKnown RBP17.01■□□□□ 0.31
COMMD4-210ENST00000564587 GARTP22102 1010 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 CYP2J2P51589 502 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 GOLGA8FQ08AF8 430 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 GOLGA8DPQ0D2H9 430 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 STRN3Q13033 797 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-210ENST00000564587 PLCB4Q15147 1175 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 E4F1Q66K89 784 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-210ENST00000564587 GBP6Q6ZN66 633 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 USP37Q86T82 979 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 KSR1Q8IVT5 923 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 NPLOC4Q8TAT6 608 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 DEPTORQ8TB45 409 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 TMEM134Q9H6X4 195 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 PLCB1Q9NQ66 1216 aa17.01■□□□□ 0.31
COMMD4-210ENST00000564587 CEP72Q9P209 647 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms