RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 CUTAO60888 179 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 DTNBO60941 627 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 APOL3O95236 402 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 RNASE1P07998 156 aaKnown RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 MCAMP43121 646 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 TM4SF4P48230 202 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 GALK1P51570 392 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 PRR5P85299 388 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 DSC2Q02487 901 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 ZRSR2Q15696 482 aaKnown RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 PLEKHN1Q494U1 663 aaPredicted RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 C10orf62Q5T681 223 aaPredicted RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 BTNL9Q6UXG8 535 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 LIPIQ6XZB0 460 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 CDYL2Q8N8U2 506 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 MARCH10Q8NA82 808 aaPredicted RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 BTBD2Q9BX70 525 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 SLC39A2Q9NP94 309 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 NGRNQ9NPE2 291 aaKnown RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 INCENPQ9NQS7 918 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 ADAMTS6Q9UKP5 1117 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 CFAP20Q9Y6A4 193 aaKnown RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 SEC24DO94855 1032 aaPredicted RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 FBLN1P23142 703 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 CD97P48960 835 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 YBX1P67809 324 aaKnown RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 CDK17Q00537 523 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 PPARAQ07869 468 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 PGS1Q32NB8 556 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 KRT78Q8N1N4 520 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 IGDCC4Q8TDY8 1250 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 PTPN18Q99952 460 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 RNF32Q9H0A6 362 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 GREM2Q9H772 168 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 NLRC4Q9NPP4 1024 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 ARHGAP28Q9P2N2 729 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 DAAM1Q9Y4D1 1078 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 MAFGO15525 162 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 MPOP05164 745 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 MYBP10242 640 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 RAC2P15153 192 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 APEX1P27695 318 aaKnown RBP3.26□□□□□ -1.89
CHD9-209ENST00000564255 HTR1BP28222 390 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 IL12RB1P42701 662 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 AK2P54819 239 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 MALLQ13021 153 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 C3orf36Q3SXR2 165 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 FAM83BQ5T0W9 1011 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 KLHDC10Q6PID8 442 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 NPNTQ6UXI9 565 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 GAREM2Q75VX8 874 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 BMP8AQ7Z5Y6 402 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 PPM1NQ8N819 430 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 FLAD1Q8NFF5 587 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 CGRRF1Q99675 332 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 B3GNT5Q9BYG0 378 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 BHMT2Q9H2M3 363 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.26□□□□□ -1.89
CHD9-209ENST00000564255 HCFC2Q9Y5Z7 792 aa3.26□□□□□ -1.89
CHD9-209ENST00000564255 GOLIM4O00461 696 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 PCDH8O95206 1070 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 PFKPQ01813 784 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 PPP3CAQ08209 521 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 LLGL1Q15334 1064 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 MUM1L1Q5H9M0 696 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 KANK2Q63ZY3 851 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 ERAP2Q6P179 960 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 CXXC5Q7LFL8 322 aaKnown RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 AMIGO3Q86WK7 504 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 DTX3Q8N9I9 347 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 ABHD4Q8TB40 342 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 NSUN6Q8TEA1 469 aaKnown RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 CPA5Q8WXQ8 436 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 INTS4Q96HW7 963 aaKnown RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 PAWRQ96IZ0 340 aaKnown RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 MYD88Q99836 296 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 MTG2Q9H4K7 406 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 PTPRHQ9HD43 1115 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 EVLQ9UI08 416 aaPredicted RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 PCDHB6Q9Y5E3 794 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 A0A0A6YYK5 440 aaPredicted RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 HRKO00198 91 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 FURINP09958 794 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 ZKSCAN1P17029 563 aaPredicted RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 RAB3GAP1Q15042 981 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 GRAMD1BQ3KR37 738 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 ANO6Q4KMQ2 910 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 INO80DQ53TQ3 878 aaPredicted RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 RNF220Q5VTB9 566 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 DARS2Q6PI48 645 aaKnown RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 ETV3LQ6ZN32 361 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 CCDC149Q6ZUS6 474 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 IFNL2Q8IZJ0 200 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 AGBL5Q8NDL9 886 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 GAB3Q8WWW8 586 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 HOXB13Q92826 284 aaPredicted RBP3.25□□□□□ -1.89
CHD9-209ENST00000564255 EVI5LQ96CN4 794 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 PGBD4Q96DM1 585 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 SOX7Q9BT81 388 aa3.25□□□□□ -1.89
CHD9-209ENST00000564255 OR10A5Q9H207 317 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms