RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 HDAC6Q9UBN7 1215 aa8.56□□□□□ -1.04
TCF4-221ENST00000563888 DBNLQ9UJU6 430 aaKnown RBP8.56□□□□□ -1.04
TCF4-221ENST00000563888 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
TCF4-221ENST00000563888 PNMA6EA0A0J9YXQ4 647 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 C5orf67F2Z3F1 127 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 PER2O15055 1255 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 GLP2RO95838 553 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 PDE6AP16499 860 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 DNAJB1P25685 340 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 GSTT1P30711 240 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 CLCN5P51795 746 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 RBL2Q08999 1139 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 BAATQ14032 418 aaPredicted RBP8.55□□□□□ -1.04
TCF4-221ENST00000563888 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
TCF4-221ENST00000563888 GRM2Q14416 872 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 TRIM71Q2Q1W2 868 aaKnown RBP8.55□□□□□ -1.04
TCF4-221ENST00000563888 C12orf60Q5U649 245 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 ZNF468Q5VIY5 522 aaPredicted RBP8.55□□□□□ -1.04
TCF4-221ENST00000563888 C16orf86Q6ZW13 317 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 MORC4Q8TE76 937 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 SEPT8Q92599 483 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 KAT2BQ92831 832 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 HAUS7Q99871 368 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 TLE6Q9H808 572 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 GPR108Q9NPR9 543 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 SMC4Q9NTJ3 1288 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 DNAJB12Q9NXW2 375 aaKnown RBP8.55□□□□□ -1.04
TCF4-221ENST00000563888 STK17AQ9UEE5 414 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 GTF2IRD1Q9UHL9 959 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 NOB1Q9ULX3 412 aaKnown RBP8.55□□□□□ -1.04
TCF4-221ENST00000563888 PLAGL2Q9UPG8 496 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 GPR179Q6PRD1 2367 aa8.55□□□□□ -1.04
TCF4-221ENST00000563888 EMSYQ7Z589 1322 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 ZNF532Q9HCE3 1301 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.54□□□□□ -1.04
TCF4-221ENST00000563888 J3QW42 95 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
TCF4-221ENST00000563888 SIN3BO75182 1162 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 KIF4AO95239 1232 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 MMP1P03956 469 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 GNAI3P08754 354 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 USP17L7P0C7H9 530 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 BMP3P12645 472 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 ATF7P17544 494 aaPredicted RBP8.54□□□□□ -1.04
TCF4-221ENST00000563888 ALDH5A1P51649 535 aaPredicted RBP8.54□□□□□ -1.04
TCF4-221ENST00000563888 ATXN1P54253 815 aaKnown RBP8.54□□□□□ -1.04
TCF4-221ENST00000563888 GPLD1P80108 840 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 MTX1Q13505 466 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 TKFCQ3LXA3 575 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 PLEKHG4Q58EX7 1191 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 SLFN13Q68D06 897 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 SESTD1Q86VW0 696 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 DHX37Q8IY37 1157 aaKnown RBP8.54□□□□□ -1.04
TCF4-221ENST00000563888 DTWD2Q8NBA8 298 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 MICAL1Q8TDZ2 1067 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 RUBCNQ92622 972 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 RNF34Q969K3 372 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 MKNK2Q9HBH9 465 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 AVENQ9NQS1 362 aaPredicted RBP8.54□□□□□ -1.04
TCF4-221ENST00000563888 IGSF5Q9NSI5 407 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 NYAP2Q9P242 653 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 ADD3Q9UEY8 706 aaKnown RBP8.54□□□□□ -1.04
TCF4-221ENST00000563888 SORCS3Q9UPU3 1222 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 SPEGQ15772 3267 aa8.54□□□□□ -1.04
TCF4-221ENST00000563888 NBEAQ8NFP9 2946 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 PTPDC1A2A3K4 754 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 C2CD2LO14523 706 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 MBD4O95243 580 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 ASGR2P07307 311 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 MMP3P08254 477 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 CTSHP09668 335 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 CALML3P27482 149 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 ADH6P28332 368 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 ZNF76P36508 570 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 MAP2K3P46734 347 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 BTG3Q14201 252 aaPredicted RBP8.53□□□□□ -1.04
TCF4-221ENST00000563888 PEAR1Q5VY43 1037 aaPredicted RBP8.53□□□□□ -1.04
TCF4-221ENST00000563888 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 CCDC105Q8IYK2 499 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 SCFD2Q8WU76 684 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 RIN2Q8WYP3 895 aaPredicted RBP8.53□□□□□ -1.04
TCF4-221ENST00000563888 SUSD6Q92537 303 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 SEMA4AQ9H3S1 761 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 METTL5Q9NRN9 209 aaKnown RBP8.53□□□□□ -1.04
TCF4-221ENST00000563888 CCPG1Q9ULG6 757 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 RWDD3Q9Y3V2 267 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 TANC1Q9C0D5 1861 aa8.53□□□□□ -1.04
TCF4-221ENST00000563888 PARP14Q460N5 1801 aa8.52□□□□□ -1.04
TCF4-221ENST00000563888 SURF6O75683 361 aaKnown RBP8.52□□□□□ -1.05
TCF4-221ENST00000563888 ARIH2O95376 493 aa8.52□□□□□ -1.05
TCF4-221ENST00000563888 LINC00271P0C7V0 271 aa8.52□□□□□ -1.05
TCF4-221ENST00000563888 HOXD8P13378 290 aaPredicted RBP8.52□□□□□ -1.05
TCF4-221ENST00000563888 EIF2AK2P19525 551 aaKnown RBP8.52□□□□□ -1.05
TCF4-221ENST00000563888 CASTP20810 708 aaKnown RBP8.52□□□□□ -1.05
TCF4-221ENST00000563888 ERCC5P28715 1186 aaPredicted RBP8.52□□□□□ -1.05
TCF4-221ENST00000563888 STAT2P52630 851 aa8.52□□□□□ -1.05
TCF4-221ENST00000563888 KIAA0753Q2KHM9 967 aa8.52□□□□□ -1.05
TCF4-221ENST00000563888 TMED8Q6PL24 325 aaPredicted RBP8.52□□□□□ -1.05
TCF4-221ENST00000563888 FAM35AQ86V20 835 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms