RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PRSS33Q8NF86 280 aa18.92■□□□□ 0.62
HDGFL3-203ENST00000563404 ETNPPLQ8TBG4 499 aa18.92■□□□□ 0.62
HDGFL3-203ENST00000563404 PBXIP1Q96AQ6 731 aa18.92■□□□□ 0.62
HDGFL3-203ENST00000563404 MBOAT7Q96N66 472 aa18.92■□□□□ 0.62
HDGFL3-203ENST00000563404 AIFM3Q96NN9 605 aa18.92■□□□□ 0.62
HDGFL3-203ENST00000563404 LARP6Q9BRS8 491 aaKnown RBP18.92■□□□□ 0.62
HDGFL3-203ENST00000563404 SEPT9Q9UHD8 586 aaPredicted RBP18.92■□□□□ 0.62
HDGFL3-203ENST00000563404 NT5C1B-RDH14C9J2C7 533 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 EOMESO95936 686 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 KRT17Q04695 432 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 RUFY3Q7L099 469 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 TMC7Q7Z402 723 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 RDM1Q8NG50 284 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 SCLT1Q96NL6 688 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 PHOX2BQ99453 314 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 ZSWIM6Q9HCJ5 1215 aa18.91■□□□□ 0.62
HDGFL3-203ENST00000563404 A0A087WZ62 844 aa18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 C2orf71A6NGG8 1288 aa18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 BCAR1P56945 870 aa18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 SSRP1Q08945 709 aaKnown RBP18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 XKR3Q5GH77 459 aa18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 TMEM173Q86WV6 379 aaPredicted RBP18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 BLIDQ8IZY5 108 aa18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 MRPL43Q8N983 215 aaKnown RBP18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 ASIC4Q96FT7 647 aa18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 FDXACB1Q9BRP7 624 aaPredicted RBP18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 GCOM2Q9BZD3 368 aaPredicted RBP18.9■□□□□ 0.62
HDGFL3-203ENST00000563404 MEIS3P2A8K0S8 358 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 EML1O00423 815 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 CLASP2O75122 1294 aaKnown RBP18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 SRGAP2BP0DMP2 458 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 SP100P23497 879 aaPredicted RBP18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 PHKA2P46019 1235 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 SIGLEC14Q08ET2 396 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 SMC1AQ14683 1233 aaKnown RBP18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 LONRF3Q496Y0 759 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 ANO5Q75V66 913 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 KSR1Q8IVT5 923 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 TRIM22Q8IYM9 498 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 DAGLBQ8NCG7 672 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 LPPQ93052 612 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 CHST12Q9NRB3 414 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 DACT1Q9NYF0 836 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 HCFC2Q9Y5Z7 792 aa18.89■□□□□ 0.61
HDGFL3-203ENST00000563404 DDX11L8A8MPP1 907 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 SLC37A4O43826 429 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 MAFO75444 373 aaPredicted RBP18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 REC8O95072 547 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 DEXIO95424 95 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 HOXB8P17481 243 aaPredicted RBP18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 PTPN21Q16825 1174 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 PLA2G4FQ68DD2 849 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 BCL7CQ8WUZ0 217 aaPredicted RBP18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 ZNF274Q96GC6 653 aaPredicted RBP18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 TRAIPQ9BWF2 469 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 C22orf23Q9BZE7 217 aa18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 SUCLA2Q9P2R7 463 aaPredicted RBP18.88■□□□□ 0.61
HDGFL3-203ENST00000563404 STK3Q13188 491 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 INF2Q27J81 1249 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 MOXD1Q6UVY6 613 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 RHPN2Q8IUC4 686 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 FBXL6Q8N531 539 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 ZNF579Q8NAF0 562 aaKnown RBP18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 AUTS2Q8WXX7 1259 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 CASP10Q92851 521 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 MRPL9Q9BYD2 267 aaKnown RBP18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 KCNJ14Q9UNX9 436 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 USP34Q70CQ2 3546 aa18.87■□□□□ 0.61
HDGFL3-203ENST00000563404 ZDBF2Q9HCK1 2354 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 KMT2EQ8IZD2 1858 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 B4GALT3O60512 393 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 DTNBO60941 627 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 ZC3H11AO75152 810 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 CXCL14O95715 111 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 SFPQP23246 707 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 ALDH7A1P49419 539 aaKnown RBP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 DNM2P50570 870 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 VCPP55072 806 aaKnown RBP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 CDC42EP1Q00587 391 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 TCF15Q12870 199 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 NONOQ15233 471 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 TWF2Q6IBS0 349 aaKnown RBP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 KANK3Q6NY19 840 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 FEZF2Q8TBJ5 459 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 ZBP1Q9H171 429 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 ADAM7Q9H2U9 754 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 POMKQ9H5K3 350 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 NRDE2Q9H7Z3 1164 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 TBC1D13Q9NVG8 400 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 WRAP73Q9P2S5 460 aaPredicted RBP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 DDX25Q9UHL0 483 aaKnown RBP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 PIN4Q9Y237 131 aaKnown RBP18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 CYP46A1Q9Y6A2 500 aa18.86■□□□□ 0.61
HDGFL3-203ENST00000563404 CPLX1O14810 134 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 OFD1O75665 1012 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 WEE2P0C1S8 567 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 NPEPPSP55786 919 aa18.85■□□□□ 0.61
HDGFL3-203ENST00000563404 PSMC5P62195 406 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms