RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ZNF668Q96K58 619 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 HINFPQ9BQA5 517 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 ADAMTS10Q9H324 1103 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 GABBR1Q9UBS5 961 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 PCDHA10Q9Y5I2 948 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 DENND4AQ7Z401 1863 aa20.17■□□□□ 0.82
TSPAN3-208ENST00000560514 NPR3P17342 541 aa20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 RNASELQ05823 741 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 NONOQ15233 471 aaKnown RBP eCLIP20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 GPR149Q86SP6 731 aa20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 SLC22A17Q8WUG5 538 aa20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 EMILIN2Q9BXX0 1053 aa20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 KCNK12Q9HB15 430 aa20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 NRBP2Q9NSY0 501 aa20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 RBM28Q9NW13 759 aaKnown RBP20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 IGSF9Q9P2J2 1179 aa20.16■□□□□ 0.82
TSPAN3-208ENST00000560514 FAM86B1E9PN63 330 aa20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 hCG_1984214I3L0E3 225 aa20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 DHX15O43143 795 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 FAM86B2P0C5J1 330 aa20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 DARSP14868 501 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 KLRC2P26717 231 aa20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 ZNF598Q86UK7 904 aaKnown RBP20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 ZNF713Q8N859 430 aaPredicted RBP20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 IGSF21Q96ID5 467 aa20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 CNTNAP5Q8WYK1 1306 aa20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 CACNA1AO00555 2505 aa20.15■□□□□ 0.82
TSPAN3-208ENST00000560514 SKIP12755 728 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 FGFR4P22455 802 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 GPC3P51654 580 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 JAKMIP3Q5VZ66 844 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 TYW1BQ6NUM6 668 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 GLB1LQ6UWU2 654 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 KIAA2013Q8IYS2 634 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 RMDN1Q96DB5 314 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 LRRC2Q9BYS8 371 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 CHST12Q9NRB3 414 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 STK39Q9UEW8 545 aa20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 EP300Q09472 2414 aaPredicted RBP20.14■□□□□ 0.81
TSPAN3-208ENST00000560514 LETM2Q2VYF4 491 aa20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 TWF2Q6IBS0 349 aaKnown RBP20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 ZC3H14Q6PJT7 736 aaKnown RBP20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 TMEM173Q86WV6 379 aaPredicted RBP20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 BARHL2Q9NY43 387 aa20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 INPP5FQ9Y2H2 1132 aa20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 V9GY48 417 aaPredicted RBP20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 WDR81Q562E7 1941 aa20.13■□□□□ 0.81
TSPAN3-208ENST00000560514 IGLV3-22A0A075B6J6 115 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 OATP04181 439 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 CFHP08603 1231 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 PHKA2P46019 1235 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 CLK2P49760 499 aaKnown RBP20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 CDC42EP1Q00587 391 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 TBC1D8BQ0IIM8 1120 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 PUM1Q14671 1186 aaKnown RBP eCLIP20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 NOMO2Q5JPE7 1267 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 ELMSAN1Q6PJG2 1045 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 C15orf39Q6ZRI6 1047 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 SGMS1Q86VZ5 419 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 LINC01465Q8N7H1 131 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 STAMQ92783 540 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 GBP3Q9H0R5 595 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 WNT16Q9UBV4 365 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 C2orf16Q68DN1 1984 aa20.12■□□□□ 0.81
TSPAN3-208ENST00000560514 MED19A0JLT2 244 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 WDR64B1ANS9 1081 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 GALTP07902 379 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 CYP3A4P08684 503 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 SFPQP23246 707 aaKnown RBP eCLIP20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 GBP2P32456 591 aaPredicted RBP20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 PTPN14Q15678 1187 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 RTN1Q16799 776 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 LONRF3Q496Y0 759 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 NRDE2Q9H7Z3 1164 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 TBC1D13Q9NVG8 400 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 R4GN57 208 aa20.11■□□□□ 0.81
TSPAN3-208ENST00000560514 SSBP05455 408 aaKnown RBP eCLIP20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 CLCN4P51793 760 aa20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 PRR16Q569H4 304 aa20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 URGCPQ8TCY9 931 aa20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 RIN2Q8WYP3 895 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 LPPQ93052 612 aa20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 KLHL5Q96PQ7 755 aa20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 FAM193BQ96PV7 902 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 INO80BQ9C086 356 aaPredicted RBP20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 MRPL17Q9NRX2 175 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 DPP7Q9UHL4 492 aa20.1■□□□□ 0.81
TSPAN3-208ENST00000560514 NARSO43776 548 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 CSDE1O75534 798 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 DNM2P50570 870 aa20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 RAB27AP51159 221 aa20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 PRKCEQ02156 737 aa20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 APOA5Q6Q788 366 aa20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 PGBD4Q96DM1 585 aa20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 DISC1Q9NRI5 854 aa20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 CA14Q9ULX7 337 aa20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 PIN4Q9Y237 131 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-208ENST00000560514 SLC27A2O14975 620 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms