RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 Q9Y3F1 56 aa19.07■□□□□ 0.64
CHRNA3-206ENST00000559658 ADAMTS4O75173 837 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 KLRC1P26715 233 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 UBASH3AP57075 661 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 GJA9P57773 515 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 RTP1P59025 263 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 PURAQ00577 322 aaKnown RBP19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 MFSD10Q14728 455 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 EFCAB12Q6NXP0 572 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 METTL13Q8N6R0 699 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 ZSWIM2Q8NEG5 633 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 LMBR1Q8WVP7 490 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 SPIRE2Q8WWL2 714 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 ANP32BQ92688 251 aaKnown RBP19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 WBP1LQ9NX94 342 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 ARHGAP28Q9P2N2 729 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 TRAF3IP3Q9Y228 551 aa19.06■□□□□ 0.64
CHRNA3-206ENST00000559658 UBE4BO95155 1302 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 LRRIQ4A6NIV6 560 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 TEX33O43247 280 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 SMIM10L2AP0DMW4 78 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 SMIM10L2BP0DMW5 78 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 NR2F2P24468 414 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 MAP2K1Q02750 393 aaPredicted RBP19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 ZC3H3Q8IXZ2 948 aaKnown RBP19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 LINC01465Q8N7H1 131 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 TSG101Q99816 390 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 UPF3AQ9H1J1 476 aaKnown RBP19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 ST6GALNAC4Q9H4F1 302 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 LIMA1Q9UHB6 759 aaKnown RBP19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 PCDHB13Q9Y5F0 798 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 SCN10AQ9Y5Y9 1956 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 PDXKO00764 312 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 NR3C1P04150 777 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 RARBP10826 455 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 CASP4P49662 377 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 ZNF484Q5JVG2 852 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 GNASQ5JWF2 1037 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 SLC39A4Q6P5W5 647 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 MTHFD1LQ6UB35 978 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 CXCL17Q6UXB2 119 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 DNAJC5GQ8N7S2 189 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 SH3TC2Q8TF17 1288 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 MRFAP1L1Q96HT8 127 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 NTPCRQ9BSD7 190 aaKnown RBP19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 VPS16Q9H269 839 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 XPNPEP3Q9NQH7 507 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 AGPAT3Q9NRZ7 376 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 TBX20Q9UMR3 447 aa19.05■□□□□ 0.64
CHRNA3-206ENST00000559658 TTLL13PA6NNM8 815 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 ANKRD63C9JTQ0 380 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 HAS3O00219 553 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 GNRH1P01148 92 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 PSEN2P49810 448 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 ZNF200P98182 395 aaPredicted RBP19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 LAMTOR4Q0VGL1 99 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 RHPN2Q8IUC4 686 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 PXYLP1Q8TE99 480 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 IFT74Q96LB3 600 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 BEGAINQ9BUH8 593 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 C17orf75Q9HAS0 396 aa19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 SUCLA2Q9P2R7 463 aaPredicted RBP19.04■□□□□ 0.64
CHRNA3-206ENST00000559658 A0A1B0GTH6 734 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 KIF20AO95235 890 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 COPB1P53618 953 aaKnown RBP19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 FKBP3Q00688 224 aaKnown RBP19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 ADAM9Q13443 819 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 EDRF1Q3B7T1 1238 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 MAP4K3Q8IVH8 894 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 CBWD1Q9BRT8 395 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 GBP3Q9H0R5 595 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 PPME1Q9Y570 386 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 COL1A2P08123 1366 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 AKAP3O75969 853 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 MYCP01106 439 aaPredicted RBP19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 VTNP04004 478 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 SRGAP2CP0DJJ0 459 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 NAMPTP43490 491 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 SMTNP53814 917 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 MIIPQ5JXC2 388 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 IER5Q5VY09 327 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 FOXR2Q6PJQ5 311 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 RUFY4Q6ZNE9 571 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 SYCP3Q8IZU3 236 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 PSPC1Q8WXF1 523 aaKnown RBP19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 NLRP4Q96MN2 994 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 ACCSQ96QU6 501 aa19.03■□□□□ 0.64
CHRNA3-206ENST00000559658 CALUO43852 315 aaPredicted RBP19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 ADSSP30520 456 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 GRK4P32298 578 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 CYP2J2P51589 502 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 STXBP4Q6ZWJ1 553 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 RNF149Q8NC42 400 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 DEPTORQ8TB45 409 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 NOC3LQ8WTT2 800 aaKnown RBP19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 PCIF1Q9H4Z3 704 aa19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 DDX20Q9UHI6 824 aaKnown RBP19.02■□□□□ 0.64
CHRNA3-206ENST00000559658 CSDE1O75534 798 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms