RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 PPP2CAP67775 309 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 FHL2Q14192 279 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 PDCD1Q15116 288 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 KIAA1841Q6NSI8 718 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 PALM2Q8IXS6 379 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 SCYL1Q96KG9 808 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 MEGF9Q9H1U4 602 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 SPC25Q9HBM1 224 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 TOPORSQ9NS56 1045 aaPredicted RBP4.67□□□□□ -1.66
CASC4-210ENST00000559550 KCMF1Q9P0J7 381 aa4.67□□□□□ -1.66
CASC4-210ENST00000559550 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 A0A0A6YYJ9 748 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 PRSS38A1L453 326 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 MATN2O00339 956 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 KDM1AO60341 852 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 BRINP1O60477 761 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 CLEC2LP0C7M8 214 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 MAP3K12Q12852 859 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 AGBL4Q5VU57 503 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 ZNF585AQ6P3V2 769 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 ARHGEF18Q6ZSZ5 1173 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 ESPNLQ6ZVH7 1005 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 HDGFL2Q7Z4V5 671 aaPredicted RBP4.66□□□□□ -1.66
CASC4-210ENST00000559550 PLEKHH3Q7Z736 793 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 RASSF3Q86WH2 238 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 CXorf67Q86X51 503 aaPredicted RBP4.66□□□□□ -1.66
CASC4-210ENST00000559550 RTKN2Q8IZC4 609 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 COG1Q8WTW3 980 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 ANO3Q9BYT9 981 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 PITHD1Q9GZP4 211 aaPredicted RBP4.66□□□□□ -1.66
CASC4-210ENST00000559550 HAPLN2Q9GZV7 340 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 PRDM12Q9H4Q4 367 aa4.66□□□□□ -1.66
CASC4-210ENST00000559550 USP36Q9P275 1121 aaKnown RBP4.66□□□□□ -1.66
CASC4-210ENST00000559550 SAE1Q9UBE0 346 aaPredicted RBP4.66□□□□□ -1.66
CASC4-210ENST00000559550 APOBEC2Q9Y235 224 aaKnown RBP4.66□□□□□ -1.66
CASC4-210ENST00000559550 A0A0A6YYK5 440 aaPredicted RBP4.65□□□□□ -1.67
CASC4-210ENST00000559550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.65□□□□□ -1.67
CASC4-210ENST00000559550 GPR39O43194 453 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 OPHN1O60890 802 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 PCDH8O95206 1070 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 MANFP55145 182 aaKnown RBP4.65□□□□□ -1.67
CASC4-210ENST00000559550 BCAR1P56945 870 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 TMPRSS15P98073 1019 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 HGFACQ04756 655 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 ADAM15Q13444 863 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 ACAP1Q15027 740 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 DGKDQ16760 1214 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 SPDYAQ5MJ70 313 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 BMP8AQ7Z5Y6 402 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 LYSMD2Q8IV50 215 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 CMIPQ8IY22 773 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 OR14K1Q8NGZ2 314 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 CFHR4Q92496 578 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 RPGRQ92834 1020 aaKnown RBP4.65□□□□□ -1.67
CASC4-210ENST00000559550 NKD2Q969F2 451 aaPredicted RBP4.65□□□□□ -1.67
CASC4-210ENST00000559550 CHFRQ96EP1 664 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 DYDC2Q96IM9 177 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 GNRHR2Q96P88 292 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 LRRC37BQ96QE4 947 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 SOX7Q9BT81 388 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 OR10A2Q9H208 303 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 DNAI1Q9UI46 699 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 TMPRSS11EQ9UL52 423 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 DENND2AQ9ULE3 1009 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 NOC2LQ9Y3T9 749 aaKnown RBP4.65□□□□□ -1.67
CASC4-210ENST00000559550 NR2E1Q9Y466 385 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 TESMINQ9Y4I5 508 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 PPP2R3BQ9Y5P8 575 aa4.65□□□□□ -1.67
CASC4-210ENST00000559550 C2orf78A6NCI8 922 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 ARHGAP6O43182 974 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 RAB11FIP3O75154 756 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 PFKMP08237 780 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 MEOX1P50221 254 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 SESN3P58005 492 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 AMPD3Q01432 767 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 SURF1Q15526 300 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 ZMAT1Q5H9K5 638 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 RNF187Q5TA31 235 aaPredicted RBP4.64□□□□□ -1.67
CASC4-210ENST00000559550 CCDC62Q6P9F0 684 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 FRMD7Q6ZUT3 714 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 USP30Q70CQ3 517 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 DDX42Q86XP3 938 aaKnown RBP eCLIP4.64□□□□□ -1.67
CASC4-210ENST00000559550 WDR66Q8TBY9 1149 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 FERMT2Q96AC1 680 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 NEIL1Q96FI4 390 aaPredicted RBP4.64□□□□□ -1.67
CASC4-210ENST00000559550 LMF1Q96S06 567 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 DPYSL5Q9BPU6 564 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 JADE2Q9NQC1 790 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 FAM184BQ9ULE4 1060 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 CTDP1Q9Y5B0 961 aaPredicted RBP4.64□□□□□ -1.67
CASC4-210ENST00000559550 MYPNQ86TC9 1320 aa4.64□□□□□ -1.67
CASC4-210ENST00000559550 NPEPPSL1A6NEC2 478 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 ULK1O75385 1050 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 PRKD3O94806 890 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 HNRNPLP14866 589 aaKnown RBP eCLIP4.63□□□□□ -1.67
CASC4-210ENST00000559550 RAC3P60763 192 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 NFYCQ13952 458 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 TRIM25Q14258 630 aaKnown RBP4.63□□□□□ -1.67
CASC4-210ENST00000559550 CT83Q5H943 113 aa4.63□□□□□ -1.67
CASC4-210ENST00000559550 PITRM1Q5JRX3 1037 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms