RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TFDP1Q14186 410 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 PLA2G4FQ68DD2 849 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 FAM117BQ6P1L5 589 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 FAM228AQ86W67 206 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 NPAS4Q8IUM7 802 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 MCPH1Q8NEM0 835 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 PIGOQ8TEQ8 1089 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 TMEM40Q8WWA1 233 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 PRPF31Q8WWY3 499 aaKnown RBP9.44□□□□□ -0.9
TPM1-213ENST00000558400 RSPH1Q8WYR4 309 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 AK8Q96MA6 479 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 SH2D3AQ9BRG2 576 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 ATP6V0A4Q9HBG4 840 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 LMCD1Q9NZU5 365 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 KCNG1Q9UIX4 513 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 DNM3Q9UQ16 869 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 RWDD3Q9Y3V2 267 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 COL4A3BPQ9Y5P4 624 aa9.44□□□□□ -0.9
TPM1-213ENST00000558400 A0A087WZ62 844 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 LINC01553A4QN01 128 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 VPS37CA5D8V6 355 aaPredicted RBP9.43□□□□□ -0.9
TPM1-213ENST00000558400 HOXA2O43364 376 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 STX6O43752 255 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
TPM1-213ENST00000558400 MED24O75448 989 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 DGKIO75912 1065 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 EOMESO95936 686 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 RB1P06400 928 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 SRGAP2CP0DJJ0 459 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 LAMTOR4Q0VGL1 99 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 DRP2Q13474 957 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 NBR1Q14596 966 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 EMC2Q15006 297 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 FERMT3Q86UX7 667 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 CRIPAKQ8N1N5 446 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 FIBCD1Q8N539 461 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 TMEM143Q96AN5 459 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 PPP1R16BQ96T49 567 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 FDXACB1Q9BRP7 624 aaPredicted RBP9.43□□□□□ -0.9
TPM1-213ENST00000558400 TRAIPQ9BWF2 469 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 TMX1Q9H3N1 280 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 TMEM161AQ9NX61 479 aa9.43□□□□□ -0.9
TPM1-213ENST00000558400 GBF1Q92538 1859 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 A0A0U1RQF3 1178 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 ARHGEF35A5YM69 484 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 C9IYK1 514 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 CYP11B2P19099 503 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 IGFBP4P22692 258 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 AXLP30530 894 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 ARL2P36404 184 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 PHKA2P46019 1235 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 MRPS5P82675 430 aaKnown RBP9.42□□□□□ -0.9
TPM1-213ENST00000558400 BTG3Q14201 252 aaPredicted RBP9.42□□□□□ -0.9
TPM1-213ENST00000558400 DSC3Q14574 896 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 NAALADL2Q58DX5 795 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 CATSPER4Q7RTX7 472 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 TMCO2Q7Z6W1 182 aaPredicted RBP9.42□□□□□ -0.9
TPM1-213ENST00000558400 CMTR2Q8IYT2 770 aaKnown RBP9.42□□□□□ -0.9
TPM1-213ENST00000558400 RNF149Q8NC42 400 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 SNX29Q8TEQ0 813 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 ARNTL2Q8WYA1 636 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 ZNF689Q96CS4 500 aaPredicted RBP9.42□□□□□ -0.9
TPM1-213ENST00000558400 NLRP4Q96MN2 994 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 NFKBIZQ9BYH8 718 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 IFT122Q9HBG6 1241 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 KIAA1024Q9UPX6 916 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 EVPLQ92817 2033 aa9.42□□□□□ -0.9
TPM1-213ENST00000558400 LCHNA4D1U4 455 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 CARNS1A5YM72 827 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 VWA3AA6NCI4 1184 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 ZNF623O75123 536 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 EYA4O95677 639 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 LONP1P36776 959 aaKnown RBP9.41□□□□□ -0.9
TPM1-213ENST00000558400 BMPR1AP36894 532 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 UBA7P41226 1012 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 RAB27AP51159 221 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 PTENP60484 403 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 PPP2R5AQ15172 486 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 SF3A1Q15459 793 aaKnown RBP9.41□□□□□ -0.9
TPM1-213ENST00000558400 IL17AQ16552 155 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 IFNLR1Q8IU57 520 aaPredicted RBP9.41□□□□□ -0.9
TPM1-213ENST00000558400 KSR1Q8IVT5 923 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 TMEM192Q8IY95 271 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 CNNM3Q8NE01 707 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 KIFAP3Q92845 792 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
TPM1-213ENST00000558400 CALML4Q96GE6 196 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 CDK5RAP3Q96JB5 506 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 ZNF668Q96K58 619 aaPredicted RBP9.41□□□□□ -0.9
TPM1-213ENST00000558400 LRFN3Q9BTN0 628 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 TIPINQ9BVW5 301 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 PLVAPQ9BX97 442 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 XPNPEP1Q9NQW7 623 aa9.41□□□□□ -0.9
TPM1-213ENST00000558400 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms