RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ZNF484Q5JVG2 852 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 PDE12Q6L8Q7 609 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 SWSAP1Q6NVH7 229 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 MRPS27Q92552 414 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 SNX27Q96L92 541 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 OSMRQ99650 979 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 ATP6V0A4Q9HBG4 840 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 TMEM161AQ9NX61 479 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 FAM186AA6NE01 2351 aa12.58□□□□□ -0.4
RABGGTA-204ENST00000558376 GPR32O75388 356 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 FOSP01100 380 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 VTNP04004 478 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 SP100P23497 879 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 SREBF1P36956 1147 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 CRYBB1P53674 252 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 NAPAP54920 295 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 PLCB3Q01970 1234 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 LLGL2Q6P1M3 1020 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 FAM43BQ6ZT52 329 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 WASF1Q92558 559 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 CASD1Q96PB1 797 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 ZNF302Q9NR11 478 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 LZTS1Q9Y250 596 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 COL1A2P08123 1366 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 FAM86B1E9PN63 330 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 C22orf31O95567 290 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 FAM86B2P0C5J1 330 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 LAG3P18627 525 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 PBX3P40426 434 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 ADCY7P51828 1080 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 NR5A1Q13285 461 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 TRIM29Q14134 588 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 ODR4Q5SWX8 454 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 FAM160B1Q5W0V3 765 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 NIPA1Q7RTP0 329 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 PLA2G4DQ86XP0 818 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 RASGRP4Q8TDF6 673 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 TCF25Q9BQ70 676 aa12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 ELAC1Q9H777 363 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-204ENST00000558376 SMCO2A6NFE2 343 aa12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 GFRA3O60609 400 aa12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 ZNF76P36508 570 aa12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 KRT85P78386 507 aa12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 KCNT2Q6UVM3 1135 aa12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 TMEM117Q9H0C3 514 aa12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 PUF60Q9UHX1 559 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-204ENST00000558376 IGLV3-22A0A075B6J6 115 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 GNL2Q13823 731 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 PPP1R18Q6NYC8 613 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 MIS18BP1Q6P0N0 1132 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 TRMT1LQ7Z2T5 733 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 DIS3L2Q8IYB7 885 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 RIPOR3Q96MK2 946 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 CLIC4Q9Y696 253 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 FAM205CA6NFA0 338 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 H0Y858 1186 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■□□ 16.9
RABGGTA-204ENST00000558376 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 JAKMIP3Q5VZ66 844 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 KREMEN2Q8NCW0 462 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 CRYGNQ8WXF5 182 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 ATOH1Q92858 354 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 ZNF558Q96NG5 402 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 ADAMTS10Q9H324 1103 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 SMOC2Q9H3U7 446 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 NGRNQ9NPE2 291 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 BARHL2Q9NY43 387 aa12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 MAFBQ9Y5Q3 323 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-204ENST00000558376 IPO5O00410 1097 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 HOXB8P17481 243 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 ATP2B1P20020 1258 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 CLCN3P51790 818 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 AP3B2Q13367 1082 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 NPY5RQ15761 445 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 TMC7Q7Z402 723 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 ZBTB33Q86T24 672 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 ECHDC2Q86YB7 292 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 LINC01465Q8N7H1 131 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 BBXQ8WY36 941 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 ZNF668Q96K58 619 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 POMKQ9H5K3 350 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 SPG21Q9NZD8 308 aa12.54□□□□□ -0.4
RABGGTA-204ENST00000558376 C2CD4DB7Z1M9 353 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 CLASP2O75122 1294 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 CYP3A4P08684 503 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 SRGAP2BP0DMP2 458 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms