RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 NTPCRQ9BSD7 190 aaKnown RBP18.59■□□□□ 0.57
SNX1-203ENST00000558040 FGFBP2Q9BYJ0 223 aa18.59■□□□□ 0.57
SNX1-203ENST00000558040 SUCLA2Q9P2R7 463 aaPredicted RBP18.59■□□□□ 0.57
SNX1-203ENST00000558040 PHLPP2Q6ZVD8 1323 aa18.58■□□□□ 0.57
SNX1-203ENST00000558040 MBLAC1A4D2B0 266 aaPredicted RBP18.58■□□□□ 0.56
SNX1-203ENST00000558040 SLC16A4O15374 487 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 CLCN3P51790 818 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 CASP5P51878 434 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 TPD52L1Q16890 204 aaPredicted RBP18.58■□□□□ 0.56
SNX1-203ENST00000558040 NBPF20Q3BBV1 942 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 MARCH8Q5T0T0 291 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 FOXR2Q6PJQ5 311 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 HAUS6Q7Z4H7 955 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 GLIS3Q8NEA6 775 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 DEPTORQ8TB45 409 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 ZNF507Q8TCN5 953 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 ASAP3Q8TDY4 903 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 PRPF31Q8WWY3 499 aaKnown RBP18.58■□□□□ 0.56
SNX1-203ENST00000558040 BSNDQ8WZ55 320 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 GLT1D1Q96MS3 346 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 HDAC6Q9UBN7 1215 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 SCN10AQ9Y5Y9 1956 aa18.58■□□□□ 0.56
SNX1-203ENST00000558040 SMIM35A0A1B0GVV1 85 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 LRRIQ4A6NIV6 560 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 PPP1R37O75864 691 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 PRPF6O94906 941 aaKnown RBP18.57■□□□□ 0.56
SNX1-203ENST00000558040 HOXC8P31273 242 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 STX17P56962 302 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 LRRC63Q05C16 580 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 LAMTOR4Q0VGL1 99 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
SNX1-203ENST00000558040 MTFR1Q15390 333 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 KNOP1Q1ED39 458 aaKnown RBP18.57■□□□□ 0.56
SNX1-203ENST00000558040 UVSSAQ2YD98 709 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 SPATA1Q5VX52 437 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 CENPPQ6IPU0 288 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 SESTD1Q86VW0 696 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 NELFCDQ8IXH7 590 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 LINC01465Q8N7H1 131 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 VTI1AQ96AJ9 217 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 ARMC5Q96C12 935 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 ZNF333Q96JL9 665 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 DEFB118Q96PH6 123 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 ACCSQ96QU6 501 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 STRA6Q9BX79 667 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 TMEM206Q9H813 350 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 GRPEL1Q9HAV7 217 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 EXOC7Q9UPT5 735 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 AKT3Q9Y243 479 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 KAT6AQ92794 2004 aa18.57■□□□□ 0.56
SNX1-203ENST00000558040 DNM1LO00429 736 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 MYCP01106 439 aaPredicted RBP18.56■□□□□ 0.56
SNX1-203ENST00000558040 CYP2C9P11712 490 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 MRE11P49959 708 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 EFNA5P52803 228 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 ADAM17P78536 824 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 GTF2BQ00403 316 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 CDC42EP1Q00587 391 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 PTPN11Q06124 597 aaPredicted RBP18.56■□□□□ 0.56
SNX1-203ENST00000558040 DRP2Q13474 957 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 CAPSQ13938 189 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 ZC2HC1CQ53FD0 456 aaPredicted RBP18.56■□□□□ 0.56
SNX1-203ENST00000558040 FAM47CQ5HY64 1035 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 RHPN2Q8IUC4 686 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 ZBTB8OSQ8IWT0 167 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 TMEM161BQ8NDZ6 487 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 KCNN1Q92952 543 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 C2orf40Q9H1Z8 148 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 ARHGAP28Q9P2N2 729 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 GTF2IRD1Q9UHL9 959 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 PHF24Q9UPV7 400 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 NFE2L3Q9Y4A8 694 aa18.56■□□□□ 0.56
SNX1-203ENST00000558040 DENND3A2RUS2 1198 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 CALUO43852 315 aaPredicted RBP18.55■□□□□ 0.56
SNX1-203ENST00000558040 FGFR1OPO95684 399 aaKnown RBP18.55■□□□□ 0.56
SNX1-203ENST00000558040 RPLP2P05387 115 aaKnown RBP18.55■□□□□ 0.56
SNX1-203ENST00000558040 POU5F1BQ06416 359 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 ITGA7Q13683 1181 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 TTI2Q6NXR4 508 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 TAF2Q6P1X5 1199 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 SYCP3Q8IZU3 236 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 ZNF710Q8N1W2 664 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 GOLGA5Q8TBA6 731 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 NOC3LQ8WTT2 800 aaKnown RBP18.55■□□□□ 0.56
SNX1-203ENST00000558040 ZBTB10Q96DT7 871 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 SEZ6LQ9BYH1 1024 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 SEMA6BQ9H3T3 888 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 TYW1Q9NV66 732 aaKnown RBP18.55■□□□□ 0.56
SNX1-203ENST00000558040 OGDHLQ9ULD0 1010 aa18.55■□□□□ 0.56
SNX1-203ENST00000558040 A0A1W2PQ45 241 aaPredicted RBP18.54■□□□□ 0.56
SNX1-203ENST00000558040 A0A1W2PQY0 241 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 TRIM49BA6NDI0 452 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 PDXKO00764 312 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 PHKA2P46019 1235 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 STRN3Q13033 797 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 NCAPHQ15003 741 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 EDRF1Q3B7T1 1238 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 ANKRD40Q6AI12 368 aa18.54■□□□□ 0.56
SNX1-203ENST00000558040 HS2ST1Q7LGA3 356 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms