RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 UNQ6494/PRO21346Q6UXR6 183 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 DBX2Q6ZNG2 339 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 TICAM2Q86XR7 235 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 COL23A1Q86Y22 540 aaPredicted RBP3.89□□□□□ -1.79
TRAV28-201ENST00000557548 DCP2Q8IU60 420 aaKnown RBP3.89□□□□□ -1.79
TRAV28-201ENST00000557548 LYSMD2Q8IV50 215 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 KIAA0319LQ8IZA0 1049 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 MARCH10Q8NA82 808 aaPredicted RBP3.89□□□□□ -1.79
TRAV28-201ENST00000557548 NRG4Q8WWG1 115 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 SEC14L1Q92503 715 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PGBD4Q96DM1 585 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 MAML3Q96JK9 1138 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 CGRRF1Q99675 332 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PLCD4Q9BRC7 762 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 HERPUD2Q9BSE4 406 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 LRFN3Q9BTN0 628 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 WNT8AQ9H1J5 351 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 ADAMTS10Q9H324 1103 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 RXFP1Q9HBX9 757 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 SLAMF8Q9P0V8 285 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 RAPGEFL1Q9UHV5 662 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 TMPRSS11EQ9UL52 423 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 PALD1Q9ULE6 856 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 L1RE1Q9UN81 338 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 NUMBLQ9Y6R0 609 aa3.89□□□□□ -1.79
TRAV28-201ENST00000557548 MORC2Q9Y6X9 1032 aaPredicted RBP3.89□□□□□ -1.79
TRAV28-201ENST00000557548 TCRBV5S2A0A599 114 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CAPN8A6NHC0 703 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 GOLGA6L22H0YM25 854 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 SGSM2O43147 1006 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 PCDH8O95206 1070 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 PFKMP08237 780 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CELA3BP08861 270 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 GLI4P10075 376 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 AOAHP28039 575 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 RGS3P49796 1198 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 HERVK_113P62684 666 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 TRIM14Q14142 442 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 SPIDRQ14159 915 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 KRT72Q14CN4 511 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CNN3Q15417 329 aaKnown RBP3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CPSF6Q16630 551 aaKnown RBP eCLIP3.88□□□□□ -1.79
TRAV28-201ENST00000557548 ANO6Q4KMQ2 910 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 PAN2Q504Q3 1202 aaKnown RBP3.88□□□□□ -1.79
TRAV28-201ENST00000557548 RNF220Q5VTB9 566 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 BICRALQ6AI39 1079 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 SWSAP1Q6NVH7 229 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 GALNT18Q6P9A2 607 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 MILR1Q7Z6M3 343 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 TRIM48Q8IWZ4 208 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 ABI1Q8IZP0 508 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CPXCR1Q8N123 301 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 PAF1Q8N7H5 531 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 ARRDC4Q8NCT1 418 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 LRTOMTQ8WZ04 291 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 FOXB1Q99853 325 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CRB3Q9BUF7 120 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 AP5M1Q9H0R1 490 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 UCKL1Q9NWZ5 548 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 BTBD7Q9P203 1132 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 PRSS50Q9UI38 385 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 ACSL6Q9UKU0 697 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 IPPQ9Y573 584 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 ASB1Q9Y576 335 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CDY2AQ9Y6F7 541 aa3.88□□□□□ -1.79
TRAV28-201ENST00000557548 CFAP69A5D8W1 941 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 HMGB1P1B2RPK0 211 aaPredicted RBP3.87□□□□□ -1.79
TRAV28-201ENST00000557548 RASA4BC9J798 803 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 RASA4O43374 803 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 MGEA5O60502 916 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 EFEMP2O95967 443 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 FOSL1P15407 271 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 ITGB5P18084 799 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 CD53P19397 219 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 PIK3CBP42338 1070 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 PRIM2P49643 509 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 AGFG1P52594 562 aaKnown RBP3.87□□□□□ -1.79
TRAV28-201ENST00000557548 HK2P52789 917 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 CACNB3P54284 484 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 CYP4F8P98187 520 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 ROM1Q03395 351 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 PRKCQQ04759 706 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 MALLQ13021 153 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 IL10RAQ13651 578 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 ADRM1Q16186 407 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 ANO4Q32M45 955 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 TUBB8Q3ZCM7 444 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 LMBR1LQ6UX01 489 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 KANSL1Q7Z3B3 1105 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 DAAM2Q86T65 1068 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 MYLK4Q86YV6 388 aaPredicted RBP3.87□□□□□ -1.79
TRAV28-201ENST00000557548 SLC41A1Q8IVJ1 513 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 SMAP1Q8IYB5 467 aaPredicted RBP3.87□□□□□ -1.79
TRAV28-201ENST00000557548 OXR1Q8N573 874 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 ANKS4BQ8N8V4 417 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 NETO2Q8NC67 525 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 OR14C36Q8NHC7 312 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 KAT5Q92993 513 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 RIPOR3Q96MK2 946 aa3.87□□□□□ -1.79
TRAV28-201ENST00000557548 SCLT1Q96NL6 688 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms