RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ANTXR2P58335 489 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 WDR72Q3MJ13 1102 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 DPP8Q6V1X1 898 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-212ENST00000557477 EPM2AIP1Q7L775 607 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-212ENST00000557477 BMP8AQ7Z5Y6 402 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 BCL6BQ8N143 479 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-212ENST00000557477 CDYL2Q8N8U2 506 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 GAB3Q8WWW8 586 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 SSH1Q8WYL5 1049 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 ZCCHC14Q8WYQ9 949 aaKnown RBP6.06□□□□□ -1.44
PRPF39-212ENST00000557477 KCNN1Q92952 543 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 LRGUKQ96M69 825 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 WRNIP1Q96S55 665 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 NUP88Q99567 741 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-212ENST00000557477 FDXACB1Q9BRP7 624 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-212ENST00000557477 HAPLN2Q9GZV7 340 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 ANLNQ9NQW6 1124 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 RNF114Q9Y508 228 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 ATAD2BQ9ULI0 1458 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 A0A0A6YYK5 440 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 ETV2O00321 342 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 PRC1O43663 620 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 LPOP22079 712 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 CYP2C19P33261 490 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 KIF23Q02241 960 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 SSPNQ14714 243 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 DGKDQ16760 1214 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 RRP12Q5JTH9 1297 aaKnown RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 GRAMD4Q6IC98 578 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 CXXC5Q7LFL8 322 aaKnown RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 OTOP2Q7RTS6 562 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 TTLL6Q8N841 843 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 RSAD2Q8WXG1 361 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 RELTQ969Z4 430 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 SOX7Q9BT81 388 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 ACE2Q9BYF1 805 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 EPB41L4AQ9HCS5 686 aaPredicted RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 CDC42EP3Q9UKI2 254 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 PMF1-BGLAPU3KQ54 211 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 SMARCA4P51532 1647 aa6.05□□□□□ -1.44
PRPF39-212ENST00000557477 THOC2Q8NI27 1593 aaKnown RBP6.05□□□□□ -1.44
PRPF39-212ENST00000557477 VSTM5A8MXK1 200 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 PAX4O43316 350 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 CUTAO60888 179 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 SEC24DO94855 1032 aaPredicted RBP6.04□□□□□ -1.44
PRPF39-212ENST00000557477 GNALP38405 381 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 ADKP55263 362 aaKnown RBP6.04□□□□□ -1.44
PRPF39-212ENST00000557477 ADRM1Q16186 407 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 PRR31Q5SQ13 230 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 TMEM200BQ69YZ2 307 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 TRMT10BQ6PF06 316 aaKnown RBP6.04□□□□□ -1.44
PRPF39-212ENST00000557477 CATIPQ7Z7H3 387 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 FAM129CQ86XR2 697 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 FNIP1Q8TF40 1166 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 CLIP3Q96DZ5 547 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 DYDC2Q96IM9 177 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 CCDC136Q96JN2 1154 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 HIST1H2AHQ96KK5 128 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 SIGLEC10Q96LC7 697 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 HIST1H2AJQ99878 128 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 SPATA6Q9NWH7 488 aaPredicted RBP6.04□□□□□ -1.44
PRPF39-212ENST00000557477 GEMIN8Q9NWZ8 242 aaKnown RBP6.04□□□□□ -1.44
PRPF39-212ENST00000557477 DNAI1Q9UI46 699 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 IRAK3Q9Y616 596 aa6.04□□□□□ -1.44
PRPF39-212ENST00000557477 H0Y858 1186 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 KIF3BO15066 747 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 FARP2O94887 1054 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-212ENST00000557477 ZNF28P17035 718 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 PI3P19957 117 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 GPR15P49685 360 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 FXR1P51114 621 aaKnown RBP eCLIP6.03□□□□□ -1.44
PRPF39-212ENST00000557477 DLX2Q07687 328 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-212ENST00000557477 MESP2Q0VG99 397 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 MAP3K12Q12852 859 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 SYDE1Q6ZW31 735 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-212ENST00000557477 THEMISQ8N1K5 641 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-212ENST00000557477 MIER2Q8N344 545 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 AIFM3Q96NN9 605 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 CSRNP2Q9H175 543 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 SLC12A5Q9H2X9 1139 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 DMRT3Q9NQL9 472 aa6.03□□□□□ -1.44
PRPF39-212ENST00000557477 POLR3BQ9NW08 1133 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-212ENST00000557477 KIF21AQ7Z4S6 1674 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 A0A0G2JNJ9 132 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GOLGA6CA6NDK9 693 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GOLGA6BA6NDN3 693 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 MAFGO15525 162 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 KLHL18O94889 574 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 CHGBP05060 677 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GOLGA6DP0CG33 693 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 VCAM1P19320 739 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GLDCP23378 1020 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 STAT5BP51692 787 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 KCNQ1P51787 676 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 MGAT5Q09328 741 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 MALLQ13021 153 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 ZNF267Q14586 743 aaPredicted RBP6.02□□□□□ -1.45
PRPF39-212ENST00000557477 ANO4Q32M45 955 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GFOD2Q3B7J2 385 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 UAP1L1Q3KQV9 507 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms