RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 RTN4RL1Q86UN2 441 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-222ENST00000557356 FAM228AQ86W67 206 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-222ENST00000557356 ZBTB8OSQ8IWT0 167 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 HACE1Q8IYU2 909 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 ABI1Q8IZP0 508 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 TMEM40Q8WWA1 233 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 KIFAP3Q92845 792 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 TMEM143Q96AN5 459 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 ZNF689Q96CS4 500 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-222ENST00000557356 PGBD4Q96DM1 585 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 CALML4Q96GE6 196 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 IFT74Q96LB3 600 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 GUCD1Q96NT3 240 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 SH2D3AQ9BRG2 576 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 PLVAPQ9BX97 442 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 OSBPL7Q9BZF2 842 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 C2orf40Q9H1Z8 148 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 TMX1Q9H3N1 280 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 C17orf75Q9HAS0 396 aa8.72□□□□□ -1.01
PSEN1-222ENST00000557356 MORC2Q9Y6X9 1032 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-222ENST00000557356 BRCA2P51587 3418 aa8.71□□□□□ -1.01
PSEN1-222ENST00000557356 LINC01553A4QN01 128 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 VWA3AA6NCI4 1184 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 ZBTB39O15060 712 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 USO1O60763 962 aaKnown RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 ZNF623O75123 536 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 MYOGP15173 224 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 SCP2P22307 547 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 IGFBP4P22692 258 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 BMPR1AP36894 532 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 TXLNAP40222 546 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 EFNA5P52803 228 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 PTENP60484 403 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 DRP2Q13474 957 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 NBR1Q14596 966 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 HYIQ5T013 277 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 POTEGQ6S5H5 508 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 CRIPAKQ8N1N5 446 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 ZNF579Q8NAF0 562 aaKnown RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 MAFAQ8NHW3 353 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 MYLIPQ8WY64 445 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 ARNTL2Q8WYA1 636 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 CCDC51Q96ER9 411 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 DRC1Q96MC2 740 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 PPP1R16BQ96T49 567 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 C11orf84Q9BUA3 381 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 BHMT2Q9H2M3 363 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 IFT122Q9HBG6 1241 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 UBN1Q9NPG3 1134 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 DDX19AQ9NUU7 478 aaKnown RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 CCDC39Q9UFE4 941 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 RBM19Q9Y4C8 960 aaKnown RBP8.71□□□□□ -1.02
PSEN1-222ENST00000557356 PCDHB12Q9Y5F1 795 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 SCN5AQ14524 2016 aa8.71□□□□□ -1.02
PSEN1-222ENST00000557356 C5orf67F2Z3F1 127 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 H0YCG3 227 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 INO80B-WBP1J3KQ70 363 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 ABCD1P33897 745 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 NAMPTP43490 491 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 SMTNP53814 917 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 BMS1Q14692 1282 aaKnown RBP8.7□□□□□ -1.02
PSEN1-222ENST00000557356 FAM102BQ5T8I3 360 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 NOTUMQ6P988 496 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 TMCO2Q7Z6W1 182 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-222ENST00000557356 CABP7Q86V35 215 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 ECHDC2Q86YB7 292 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 TMEM192Q8IY95 271 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 RASSF8Q8NHQ8 419 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 DEPTORQ8TB45 409 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
PSEN1-222ENST00000557356 P2RX5Q93086 422 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 PPP2R3CQ969Q6 453 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 MRPL9Q9BYD2 267 aaKnown RBP8.7□□□□□ -1.02
PSEN1-222ENST00000557356 CCSER1Q9C0I3 900 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 TMEM117Q9H0C3 514 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 LMAN2LQ9H0V9 348 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 POLR3FQ9H1D9 316 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-222ENST00000557356 XPNPEP1Q9NQW7 623 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 AGPAT5Q9NUQ2 364 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 KANSL3Q9P2N6 904 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 CFAP45Q9UL16 551 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 MTMR6Q9Y217 621 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 PIN4Q9Y237 131 aaKnown RBP8.7□□□□□ -1.02
PSEN1-222ENST00000557356 ATP6V1DQ9Y5K8 247 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 SRPRBQ9Y5M8 271 aaKnown RBP8.7□□□□□ -1.02
PSEN1-222ENST00000557356 ADGRA3Q8IWK6 1321 aa8.7□□□□□ -1.02
PSEN1-222ENST00000557356 MKI67P46013 3256 aaKnown RBP8.69□□□□□ -1.02
PSEN1-222ENST00000557356 LCHNA4D1U4 455 aa8.69□□□□□ -1.02
PSEN1-222ENST00000557356 LRRIQ4A6NIV6 560 aa8.69□□□□□ -1.02
PSEN1-222ENST00000557356 H3BNC9 293 aa8.69□□□□□ -1.02
PSEN1-222ENST00000557356 NCK2O43639 380 aa8.69□□□□□ -1.02
PSEN1-222ENST00000557356 MGEA5O60502 916 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms