RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 USP15Q9Y4E8 981 aaPredicted RBP13.59□□□□□ -0.23
APEX1-216ENST00000557159 PCDHA2Q9Y5H9 948 aa13.59□□□□□ -0.23
APEX1-216ENST00000557159 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
APEX1-216ENST00000557159 ATP2C2O75185 946 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 GJB6O95452 261 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 CYP2D6P10635 497 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 ITGA4P13612 1032 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 COPS2P61201 443 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 CCDC15Q0P6D6 951 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
APEX1-216ENST00000557159 KRT79Q5XKE5 535 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 PODNQ7Z5L7 613 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 TBC1D1Q86TI0 1168 aaPredicted RBP13.58□□□□□ -0.24
APEX1-216ENST00000557159 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
APEX1-216ENST00000557159 TGFBRAP1Q8WUH2 860 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 THOC1Q96FV9 657 aaKnown RBP13.58□□□□□ -0.24
APEX1-216ENST00000557159 MXD3Q9BW11 206 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 KCTD10Q9H3F6 313 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 CTNNAL1Q9UBT7 734 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 RASAL2Q9UJF2 1139 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 AMFRQ9UKV5 643 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 ATP8A1Q9Y2Q0 1164 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 DAAM1Q9Y4D1 1078 aa13.58□□□□□ -0.24
APEX1-216ENST00000557159 GTPBP10A4D1E9 387 aaKnown RBP13.57□□□□□ -0.24
APEX1-216ENST00000557159 BACH1O14867 736 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 SUN1O94901 812 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 FESP07332 822 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 CCNB1P14635 433 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 UCHL3P15374 230 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 BTDP43251 543 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 ALDH5A1P51649 535 aaPredicted RBP13.57□□□□□ -0.24
APEX1-216ENST00000557159 NAPAP54920 295 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 CALCRLQ16602 461 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 MFSD14BQ5SR56 506 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 TBCKQ8TEA7 893 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 RUNDC3BQ96NL0 473 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 ELAC2Q9BQ52 826 aaKnown RBP13.57□□□□□ -0.24
APEX1-216ENST00000557159 DBNDD1Q9H9R9 158 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
APEX1-216ENST00000557159 AGAP1Q9UPQ3 857 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 GAKO14976 1311 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 SBF1O95248 1867 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 NAV1Q8NEY1 1877 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 COL4A5P29400 1685 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 FRMD3A2A2Y4 597 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 SMCO2A6NFE2 343 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 PODXLO00592 558 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 AHCYL1O43865 530 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 HADHBP55084 474 aaKnown RBP13.57□□□□□ -0.24
APEX1-216ENST00000557159 JAM2P57087 298 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 DR1Q01658 176 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 PPATQ06203 517 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 CNGA2Q16280 664 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 C16orf86Q6ZW13 317 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 JDP2Q8WYK2 163 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
APEX1-216ENST00000557159 NT5C3AQ9H0P0 336 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 RXFP1Q9HBX9 757 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 KDM3AQ9Y4C1 1321 aa13.57□□□□□ -0.24
APEX1-216ENST00000557159 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 YDJCA8MPS7 323 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
APEX1-216ENST00000557159 CETN3O15182 167 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 DDX3YO15523 660 aaKnown RBP13.56□□□□□ -0.24
APEX1-216ENST00000557159 ECE2O60344 883 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 UBOX5O94941 541 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 RWDD2BP57060 319 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 LACTBP83111 547 aaPredicted RBP13.56□□□□□ -0.24
APEX1-216ENST00000557159 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 ZDHHC24Q6UX98 284 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 CCDC65Q8IXS2 484 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 REXO1Q8N1G1 1221 aaKnown RBP13.56□□□□□ -0.24
APEX1-216ENST00000557159 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 RFFLQ8WZ73 363 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 ECT2Q9H8V3 914 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 ABCF3Q9NUQ8 709 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 MTRF1LQ9UGC7 380 aaKnown RBP13.56□□□□□ -0.24
APEX1-216ENST00000557159 PCYOX1Q9UHG3 505 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 ZNRF3Q9ULT6 936 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 RPL26L1Q9UNX3 145 aaKnown RBP13.56□□□□□ -0.24
APEX1-216ENST00000557159 TRAF3IP3Q9Y228 551 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 L3MBTL1Q9Y468 752 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 LRRC42Q9Y546 428 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 PITPNM2Q9BZ72 1349 aa13.56□□□□□ -0.24
APEX1-216ENST00000557159 G3V3G9 751 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 FZD9O00144 591 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 DIAPH2O60879 1101 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 GGPS1O95749 300 aa13.55□□□□□ -0.24
APEX1-216ENST00000557159 FGGP02679 453 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms