RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	SNED1	Q8TER0	1413 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	SMTN	P53814	917 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	ARHGAP4	P98171	946 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	PDCL	Q13371	301 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	TAOK1	Q7L7X3	1001 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	TSEN2	Q8NCE0	465 aa	Known RBP	13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	SYN2	Q92777	582 aa	Predicted RBP	13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	ARL8A	Q96BM9	186 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	DCPS	Q96C86	337 aa	Known RBP	13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	DNAJC19	Q96DA6	116 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	DNAJC17	Q9NVM6	304 aa	Known RBP	13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	WDR70	Q9NW82	654 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	ACTN1	P12814	892 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	IL1R1	P14778	569 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	ADCY8	P40145	1251 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	TSNAXIP1	Q2TAA8	658 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	KAZN	Q674X7	775 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	SAMD7	Q7Z3H4	446 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	PHLDB2	Q86SQ0	1253 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	EFCAB13	Q8IY85	973 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	PPM1K	Q8N3J5	372 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	SH2D3C	Q8N5H7	860 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	HAS1	Q92839	578 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	ZIM3	Q96PE6	472 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	TEKT3	Q9BXF9	490 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029	PACSIN1	Q9BY11	444 aa		13.26	□□□□□ -0.29
TMPO-212	ENST00000556029		A6NNZ2	444 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029		K7ENM7	598 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	AFP	P02771	609 aa	Known RBP	13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	GLI1	P08151	1106 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	TUBB8	Q3ZCM7	444 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	GBP7	Q8N8V2	638 aa	Predicted RBP	13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	MPHOSPH6	Q99547	160 aa	Known RBP	13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	ATP8A1	Q9Y2Q0	1164 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	SCN7A	Q01118	1682 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	POC1B-GALNT4	F8VUJ3	575 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	KRT14	P02533	472 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	SAT1	P21673	171 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	RASIP1	Q5U651	963 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	HGSNAT	Q68CP4	663 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	BANK1	Q8NDB2	785 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	KIFAP3	Q92845	792 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	TBK1	Q9UHD2	729 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	USH1C	Q9Y6N9	552 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	DDTL	A6NHG4	134 aa	Predicted RBP	13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	CORO7	P57737	925 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	TRPC3	Q13507	836 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	SEPT6	Q14141	434 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	VCX3B	Q9H321	246 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	AS3MT	Q9HBK9	375 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	KLHL14	Q9P2G3	628 aa		13.25	□□□□□ -0.29
TMPO-212	ENST00000556029	GRID2IP	A4D2P6	1211 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	DLAT	P10515	647 aa	Known RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	MUM1	Q2TAK8	710 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	PPP4R3CP	Q6ZMV5	832 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	TRIM59	Q8IWR1	403 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	SCFD1	Q8WVM8	642 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	RNF34	Q969K3	372 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	FGFBP2	Q9BYJ0	223 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	EHD4	Q9H223	541 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	PCIF1	Q9H4Z3	704 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	DDX4	Q9NQI0	724 aa	Known RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	EIF3H	O15372	352 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	DAPK3	O43293	454 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	ATP5D	P30049	168 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	PLTP	P55058	493 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	CYP4F22	Q6NT55	531 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	DPY19L2	Q6NUT2	758 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	SFR1	Q86XK3	245 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	ZFPM1	Q8IX07	1006 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	CFAP61	Q8NHU2	1237 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	FBXO28	Q9NVF7	368 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	TLR2	O60603	784 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	CYP11B2	P19099	503 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	SLC20A2	Q08357	652 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	ALKBH5	Q6P6C2	394 aa	Known RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	CAVIN3	Q969G5	261 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	FAM163A	Q96GL9	167 aa	Predicted RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	ZNRF3	Q9ULT6	936 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	BZW2	Q9Y6E2	419 aa	Known RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	IRS2	Q9Y4H2	1338 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	DLEC1	Q9Y238	1755 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029		A0A087WUV0	522 aa	Predicted RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	H2AFZ	P0C0S5	128 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	SLC9A1	P19634	815 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	MESD	Q14696	234 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	C15orf52	Q6ZUT6	534 aa	Known RBP	13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	H2AFV	Q71UI9	128 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	WHAMM	Q8TF30	809 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	AP1M1	Q9BXS5	423 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	IVNS1ABP	Q9Y6Y0	642 aa		13.24	□□□□□ -0.29
TMPO-212	ENST00000556029	LRRN2	O75325	713 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	ECE1	P42892	770 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	ASTE1	Q2TB18	679 aa	Predicted RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	SCYL2	Q6P3W7	929 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	ACER1	Q8TDN7	264 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	GOLPH3	Q9H4A6	298 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	LAMB2	P55268	1798 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms