RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 GRID2IPA4D2P6 1211 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 TRAF5O00463 557 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 HIP1RO75146 1068 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 RPS6KA4O75676 772 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 NUDT3O95989 172 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 NR4A1P22736 598 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 TCIRG1Q13488 830 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 DGKDQ16760 1214 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 GAGE13Q4V321 117 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 VRK3Q8IV63 474 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 PLA2G15Q8NCC3 412 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 LENG9Q96B70 501 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 TANGO6Q9C0B7 1094 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 NRDE2Q9H7Z3 1164 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 PTGFRNQ9P2B2 879 aa5.67□□□□□ -1.5
SNX6-204ENST00000555541 MASP2O00187 686 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 VSIG10L2P0DP72 767 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 ELAVL1Q15717 326 aaKnown RBP5.66□□□□□ -1.5
SNX6-204ENST00000555541 ARHGAP44Q17R89 818 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 GCDHQ92947 438 aaPredicted RBP5.66□□□□□ -1.5
SNX6-204ENST00000555541 SYNPO2LQ9H987 977 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 NCOA5Q9HCD5 579 aaKnown RBP5.66□□□□□ -1.5
SNX6-204ENST00000555541 IL23AQ9NPF7 189 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 KCMF1Q9P0J7 381 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 COL4A3Q01955 1670 aa5.66□□□□□ -1.5
SNX6-204ENST00000555541 E9PSI1 815 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 M0R2C6 588 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 GLRX3O76003 335 aaKnown RBP5.65□□□□□ -1.5
SNX6-204ENST00000555541 RHOBTB3O94955 611 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 KIF11P52732 1056 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 ROM1Q03395 351 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 CNGB1Q14028 1251 aaPredicted RBP5.65□□□□□ -1.5
SNX6-204ENST00000555541 MYBPC3Q14896 1274 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 RABL3Q5HYI8 236 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 GSPT2Q8IYD1 628 aaKnown RBP5.65□□□□□ -1.5
SNX6-204ENST00000555541 ELOA2Q8IYF1 753 aaPredicted RBP5.65□□□□□ -1.5
SNX6-204ENST00000555541 LILRB2Q8N423 598 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 MNTQ99583 582 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 TCF25Q9BQ70 676 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 MLST8Q9BVC4 326 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 GPR87Q9BY21 358 aa5.65□□□□□ -1.5
SNX6-204ENST00000555541 A0A0A6YYK5 440 aaPredicted RBP5.64□□□□□ -1.51
SNX6-204ENST00000555541 FAM20BO75063 409 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 TOX4O94842 621 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 HNRNPLP14866 589 aaKnown RBP eCLIP5.64□□□□□ -1.51
SNX6-204ENST00000555541 ZFP36P26651 326 aaKnown RBP5.64□□□□□ -1.51
SNX6-204ENST00000555541 PTTG1IPP53801 180 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 FKBP15Q5T1M5 1219 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 PAPD7Q5XG87 772 aaKnown RBP5.64□□□□□ -1.51
SNX6-204ENST00000555541 CREB3L3Q68CJ9 461 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 NAIF1Q69YI7 327 aaPredicted RBP5.64□□□□□ -1.51
SNX6-204ENST00000555541 SLFN12LQ6IEE8 588 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 ZCCHC8Q6NZY4 707 aaKnown RBP5.64□□□□□ -1.51
SNX6-204ENST00000555541 KANSL1Q7Z3B3 1105 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 BMP8AQ7Z5Y6 402 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 ZSWIM2Q8NEG5 633 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 MDGA1Q8NFP4 955 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 THAP3Q8WTV1 239 aaPredicted RBP5.64□□□□□ -1.51
SNX6-204ENST00000555541 HAS1Q92839 578 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 MKL1Q969V6 931 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 E2F7Q96AV8 911 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 ARMC5Q96C12 935 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 SOX7Q9BT81 388 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 HIRIP3Q9BW71 556 aaPredicted RBP5.64□□□□□ -1.51
SNX6-204ENST00000555541 ENKD1Q9H0I2 346 aa5.64□□□□□ -1.51
SNX6-204ENST00000555541 UBA6A0AVT1 1052 aaPredicted RBP5.63□□□□□ -1.51
SNX6-204ENST00000555541 KRT37O76014 449 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 STC2O76061 302 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 ZNF37AP17032 561 aaPredicted RBP5.63□□□□□ -1.51
SNX6-204ENST00000555541 ITGB6P18564 788 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 PTX3P26022 381 aaPredicted RBP5.63□□□□□ -1.51
SNX6-204ENST00000555541 GTF2F1P35269 517 aaKnown RBP eCLIP5.63□□□□□ -1.51
SNX6-204ENST00000555541 PTGS2P35354 604 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 TTC38Q5R3I4 469 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 SYCE2Q6PIF2 218 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 ZNF662Q6ZS27 426 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 DYDC2Q96IM9 177 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 ZNF512Q96ME7 567 aaPredicted RBP5.63□□□□□ -1.51
SNX6-204ENST00000555541 WDR92Q96MX6 357 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 PITHD1Q9GZP4 211 aaPredicted RBP5.63□□□□□ -1.51
SNX6-204ENST00000555541 PRDM13Q9H4Q3 707 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 ACSS2Q9NR19 701 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 PPP1R1BQ9UD71 204 aaPredicted RBP5.63□□□□□ -1.51
SNX6-204ENST00000555541 HS3ST4Q9Y661 456 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 PTCH2Q9Y6C5 1203 aa5.63□□□□□ -1.51
SNX6-204ENST00000555541 A0A0A6YYJ9 748 aa5.62□□□□□ -1.51
SNX6-204ENST00000555541 PLD2O14939 933 aa5.62□□□□□ -1.51
SNX6-204ENST00000555541 RAPGEF3O95398 923 aa5.62□□□□□ -1.51
SNX6-204ENST00000555541 JUNP05412 331 aaKnown RBP5.62□□□□□ -1.51
SNX6-204ENST00000555541 KIR2DL3P43628 341 aa5.62□□□□□ -1.51
SNX6-204ENST00000555541 SMAD3P84022 425 aaKnown RBP5.62□□□□□ -1.51
SNX6-204ENST00000555541 C2orf27AQ580R0 203 aa5.62□□□□□ -1.51
SNX6-204ENST00000555541 CHST14Q8NCH0 376 aa5.62□□□□□ -1.51
SNX6-204ENST00000555541 SLC25A43Q8WUT9 341 aaPredicted RBP5.62□□□□□ -1.51
SNX6-204ENST00000555541 ADARB2Q9NS39 739 aaKnown RBP5.62□□□□□ -1.51
SNX6-204ENST00000555541 POLR3BQ9NW08 1133 aaPredicted RBP5.62□□□□□ -1.51
SNX6-204ENST00000555541 SAMD15Q9P1V8 674 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms